 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
maker-scaffold08829-snap-gene-0.9-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
| Family |
G2-like |
| Protein Properties |
Length: 252aa MW: 28091 Da PI: 5.8359 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold08829-snap-gene-0.9-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.6 | 2.5e-32 | 189 | 243 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt++LHe+Fve+v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+
maker-scaffold08829-snap-gene-0.9-mRNA-1 189 KTRIRWTQDLHEKFVECVNRLGGAEKATPKAILKLMDTDGLTIFHVKSHLQKYRI 243
68****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MNTHKIDCRE QVNQSNGVIN DCSSEFGNQS FEFLGYKQPW HMETCFQPLT MEGGSQQQYI 60
GPAKSSSTIM SHSESPASAF FATERCMGFP QYEGEVGNPS MSSQFSRTYD SQFPAYQSAG 120
EDYSIDTAHP AEPNFDLRNT LQAIGNYNSY DSPLGQLNFS SQQEKHSPRE SVSITSGNSA 180
STGAVLSSKT RIRWTQDLHE KFVECVNRLG GAEKATPKAI LKLMDTDGLT IFHVKSHLQK 240
YRIAKYMPDS TE
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-24 | 189 | 246 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
