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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold08573-augustus-gene-0.8-mRNA-1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
NAC |
Protein Properties |
Length: 531aa MW: 58686.3 Da PI: 4.5589 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold08573-augustus-gene-0.8-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 123.9 | 1.3e-38 | 20 | 142 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdk 66
pG+rF+Ptd elv+++L +kv g+k++ vi+evd+ykv PwdLp k++ +++ +wyf ++ +k
maker-scaffold08573-augustus-gene-0.8-mRNA-1 20 PGVRFNPTDVELVMFFLLRKVMGRKCPK--VIAEVDVYKVSPWDLPdKSIVKGDLKWYFLCPIEK 82
9************************888..9***************777778888********** PP
NAM 67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
ky+ g r nrat+ g Wk tg++++v+ +++lvg ktL+f+ g+ap ++tdWv+heyrl
maker-scaffold08573-augustus-gene-0.8-mRNA-1 83 KYSAGVRMNRATDVGHWKITGNERHVHY-NNTLVGSIKTLIFHMGKAPG-KRTDWVIHEYRL 142
***************************9.999***********999986.9*********98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 531 aa
Download sequence Send
to blast |
MESGNSGLGH LMGKELFPFP GVRFNPTDVE LVMFFLLRKV MGRKCPKVIA EVDVYKVSPW 60 DLPDKSIVKG DLKWYFLCPI EKKYSAGVRM NRATDVGHWK ITGNERHVHY NNTLVGSIKT 120 LIFHMGKAPG KRTDWVIHEY RLDDKYLAER GVAQNGHVLC MIYHKEGLGP KNNAQYGAPF 180 KEEDWNDDEE VGFVEVVSSG FPTPASVLPN NYSSSLAAGT SQCDGTASES FLSETVLSER 240 EVHPAVHSIN VVSKEFNQVF DGDEEVGFVE VVSSGFPTPA SVLSNNYSSS LAAGTSQCDG 300 TASESYLFET VLSEREVHPA VHSINVVSKE FNQVYDGDVT FSTSVVLIED KKNKNPIHDG 360 TDEAALPVDE STICKDLGDP VNTARLSEGG YDFSTGSPDN CLYMGDLRKP LPPEAGESQH 420 VSTNLYPGYN ANIHSELISL SSCDADKNVS HNGLAELLSD ETEIFEGLGD LGTTYRQGCN 480 FPTSFLDDFI SLEDIETEAG EPQQVSNLYQ MVFPNQKERK RKRQEDNDEI K
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3ulx_A | 9e-35 | 20 | 166 | 17 | 169 | Stress-induced transcription factor NAC1 |