 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold08297-augustus-gene-0.5-mRNA-1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
Family |
NAC |
Protein Properties |
Length: 191aa MW: 22082.4 Da PI: 8.045 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold08297-augustus-gene-0.5-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 128.9 | 4e-40 | 8 | 164 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................ 49
lppGfrF+Ptd+el+ ++Lk+k++g++ ++ +++e+d yk+ePwd+++
maker-scaffold08297-augustus-gene-0.5-mRNA-1 8 LPPGFRFSPTDKELIERFLKRKITGNDKDI-YFVPEIDFYKLEPWDIQRnllifiithppsflgy 71
79*************************999.78**************95599************* PP
NAM 50 ................kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
++++++ew+ F + + + ++g+rknr+t +g+ katgkd+e++s +g+
maker-scaffold08297-augustus-gene-0.5-mRNA-1 72 cvlccqslalwnvdicGIDTKDQEWFCFNPPSLN-QNGNRKNRTTMEGFYKATGKDREIKS-RGS 134
******99999998887777999******99875.68************************.999 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
l+g+kktLv+++gr+p+ge t+Wvmheyr
maker-scaffold08297-augustus-gene-0.5-mRNA-1 135 LIGMKKTLVYHRGRTPNGEGTKWVMHEYRT 164
****************************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MGKLSLDLPP GFRFSPTDKE LIERFLKRKI TGNDKDIYFV PEIDFYKLEP WDIQRNLLIF 60 IITHPPSFLG YCVLCCQSLA LWNVDICGID TKDQEWFCFN PPSLNQNGNR KNRTTMEGFY 120 KATGKDREIK SRGSLIGMKK TLVYHRGRTP NGEGTKWVMH EYRTTQDEFD GTHPGQVGFC 180 FSVCLIDVIL T
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3ulx_A | 3e-30 | 2 | 163 | 9 | 139 | Stress-induced transcription factor NAC1 |