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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
maker-scaffold08043-augustus-gene-0.8-mRNA-1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 253aa MW: 28836.1 Da PI: 4.9115 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold08043-augustus-gene-0.8-mRNA-1 | genome | THGP | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 142.1 | 3.3e-44 | 5 | 138 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekew 58
ppGfrF Pt+eelv++yL++k+eg + ++++i+ vdiy+++Pw+Lp+ ++++ ++w
maker-scaffold08043-augustus-gene-0.8-mRNA-1 5 PPGFRFYPTEEELVSFYLHNKLEGARedlnRVMDRIIPVVDIYDSKPWELPQfsgdLCHGDPEQW 69
9***********************99666433445799*************656764455777** PP
NAM 59 yfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvm 123
+fF++r++++a+g r++r t++gyWkatg+ + v+s++++ +glk+t+vfy+grap+g+kt+W m
maker-scaffold08043-augustus-gene-0.8-mRNA-1 70 FFFIPRQESEARGGRPRRLTQTGYWKATGSPNYVYSSNNRIIGLKRTMVFYNGRAPNGSKTEWKM 134
***************************************************************** PP
NAM 124 heyr 127
+ey+
maker-scaffold08043-augustus-gene-0.8-mRNA-1 135 NEYK 138
***8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MEDFPPGFRF YPTEEELVSF YLHNKLEGAR EDLNRVMDRI IPVVDIYDSK PWELPQFSGD 60
LCHGDPEQWF FFIPRQESEA RGGRPRRLTQ TGYWKATGSP NYVYSSNNRI IGLKRTMVFY 120
NGRAPNGSKT EWKMNEYKAI DGEVPASTSA TPTLRQEFSL CRVYKKSKCL RAFDRRPPGV 180
IVNEPAAQQV PQGDEATPSR LNPSLTERIS SPDSSSSGDQ GQLSQPGEST GNMAVDNETF 240
WDFEQLNWFQ GLD
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-33 | 4 | 166 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-33 | 4 | 166 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-33 | 4 | 166 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-33 | 4 | 166 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-33 | 4 | 166 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-33 | 4 | 166 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-33 | 4 | 166 | 17 | 165 | NAC domain-containing protein 19 |
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