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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold07211-snap-gene-0.10-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
bHLH |
Protein Properties |
Length: 438aa MW: 46970 Da PI: 9.1284 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold07211-snap-gene-0.10-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 49 | 1.1e-15 | 260 | 305 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq
maker-scaffold07211-snap-gene-0.10-mRNA-1 260 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 305
9************************8.....7******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
GO:0009506 | Cellular Component | plasmodesma |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MHGLGPPRGP VKPIPSTTSL AKYNTWDKPR ASGTLESIVN QATLIPQHQH QHHSQHNHNS 60 NNHGQKPRSF DSGGGSDMVS WFHHRAAVAA AATTSATMTM TMDALVPCSN RTDDQTTTQA 120 GLGGSGTCVV GCSTRVGSCS GPVASGTMTH DQDENVIIKR ANKEARVAVP AAAAAAAAAA 180 APEWSGRDQS VSGSATCGRD SQHVTIDTCE RDLGATTTGD DHDSVCHSRP QREARDGEDK 240 KKSSAKSSVS TKRSRAAAIH NQSERKRRDK INQRMKTLQK LVPNSSKTDK ASMLDEVIEY 300 LKQLQAQVQM MSRMSMPPMM LPMAMQQQLQ MSMMAPMGMG MGMGMGLGMG MDMNNINRSN 360 ISGISPVLHP TAFMPMTSWD AGSGDRIQAN SPAVMADPFS TFLACQSQPM TMDAYSRMAA 420 AMYQQQQLHQ PPPSSSKS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 263 | 268 | ERKRRD |
2 | 264 | 269 | RKRRDK |
Functional Description ? help
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Source |
Description |
UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |