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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
maker-scaffold07067-augustus-gene-0.6-mRNA-3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 175aa MW: 20668.6 Da PI: 9.6287 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold07067-augustus-gene-0.6-mRNA-3 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 125.9 | 3.3e-39 | 15 | 156 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFsk 63
lppG+rF+P+d e++ yLkkk++g++ ++ +i+e++ yk ePwdLp k ++++++ew+fF++
maker-scaffold07067-augustus-gene-0.6-mRNA-3 15 LPPGVRFSPKDPEVIELYLKKKITGHDEDT-WFIPEIEFYKDEPWDLPiKsGIATKDQEWFFFTE 78
79*************************888.78**************96346777999******* PP
NAM 64 rdkkyatgkrknra...........tksgyWkatgkdkevlskkgelvglkktLvfy...kgrap 114
++ k+++++ k+r+ tk+g+Wk+tg d+e+ +++l+g+kktLvf+ +++++
maker-scaffold07067-augustus-gene-0.6-mRNA-3 79 QSLKHQNDNPKKRKrgqkqelvnrqTKAGFWKSTGPDREIEF-GESLIGMKKTLVFHirsNKKEE 142
*****98887777667888888888****************9.999***********88767899 PP
NAM 115 kgektdWvmheyrl 128
k+++t+Wvmheyr
maker-scaffold07067-augustus-gene-0.6-mRNA-3 143 KARRTNWVMHEYRT 156
999*********96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MAFLGIMEKL SLDHLPPGVR FSPKDPEVIE LYLKKKITGH DEDTWFIPEI EFYKDEPWDL 60
PIKSGIATKD QEWFFFTEQS LKHQNDNPKK RKRGQKQELV NRQTKAGFWK STGPDREIEF 120
GESLIGMKKT LVFHIRSNKK EEKARRTNWV MHEYRTTQKE FDGKHPGQVG FCNSI
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-27 | 4 | 158 | 4 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-27 | 4 | 158 | 4 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-27 | 4 | 158 | 4 | 144 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-27 | 4 | 158 | 4 | 144 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swm_B | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swm_C | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swm_D | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swp_A | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swp_B | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swp_C | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 3swp_D | 3e-27 | 4 | 158 | 7 | 147 | NAC domain-containing protein 19 |
| 4dul_A | 3e-27 | 4 | 158 | 4 | 144 | NAC domain-containing protein 19 |
| 4dul_B | 3e-27 | 4 | 158 | 4 | 144 | NAC domain-containing protein 19 |
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