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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold06874-snap-gene-0.7-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
FAR1 |
Protein Properties |
Length: 412aa MW: 46793.8 Da PI: 8.9878 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold06874-snap-gene-0.7-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 64.5 | 2.9e-20 | 44 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkk 70
+Y+ YAk++GF++r+ + ++s+++g++ +r+fvCskeg++++ +rtgC a ++v++
maker-scaffold06874-snap-gene-0.7-mRNA-1 44 CYSLYAKRMGFKIRTGQLYRSRTDGSVSSRRFVCSKEGFQTN--------------SRTGCPAFIRVQR 98
79*************************************987..............589********** PP
FAR1 71 ekdgkwevtkleleHnHela 90
+ +gkw+++++ ++HnH+l
maker-scaffold06874-snap-gene-0.7-mRNA-1 99 NASGKWVIDHFFKDHNHDLE 118
******************96 PP
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2 | FAR1 | 59.8 | 8.5e-19 | 198 | 271 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkk 70
Y++Y+ + GF+vr+ + +s+++g+i +r+fvCskeg++++ +r+gC a +++k+
maker-scaffold06874-snap-gene-0.7-mRNA-1 198 LYHSYGASKGFRVRIGQLFRSRHDGSISSRRFVCSKEGFQHP--------------SRVGCGAYMRIKR 252
7**************************************999..............4899********* PP
FAR1 71 ekdgkwevtkleleHnHel 89
+++g+w+v++l+++HnH l
maker-scaffold06874-snap-gene-0.7-mRNA-1 253 QESGTWVVDRLREDHNHGL 271
*****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MVIKAKPVGM VRAIDYVNGE HEGGSRLEPQ VGLEFDSSDD ARECYSLYAK RMGFKIRTGQ 60 LYRSRTDGSV SSRRFVCSKE GFQTNSRTGC PAFIRVQRNA SGKWVIDHFF KDHNHDLEST 120 GENPTPFMQS KLPIVKNSLA DVTQRSKVNL LEDVEDRRPC PSGVINVKRV KRDGDDGQSK 180 VQPFLGLVFN SANEAYQLYH SYGASKGFRV RIGQLFRSRH DGSISSRRFV CSKEGFQHPS 240 RVGCGAYMRI KRQESGTWVV DRLREDHNHG LGTQMETHRG SLNASNRFIE ECANDNEKNI 300 VTFCASNLNV SCSCQMFEFE GVLCRHALRV FQILEIREIP SHYILHRWTR NAEYGTVGDA 360 ESVGTSQELK ALMLWSLRET ACKYIEAGSA SLEKYKLAYE IMREGGRKLS WQ
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |