 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
maker-scaffold06646-augustus-gene-0.12-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
| Family |
NAC |
| Protein Properties |
Length: 203aa MW: 23312.3 Da PI: 10.2614 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold06646-augustus-gene-0.12-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 68.9 | 1.4e-21 | 14 | 96 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy. 109
++ + +fF++ +k+y+tg+rk+r+++ + +W++tgk+++v++ +g+++g kk+Lv+y
maker-scaffold06646-augustus-gene-0.12-mRNA-1 14 KDGQIRHFFHRPSKAYTTGTRKRRKVHtdedgsETRWHKTGKTRPVFV-GGAVKGYKKILVLYt 76
444556******************744446555788************.9*************6 PP
NAM 110 .kgrapkgektdWvmheyrl 128
gr++k+ekt+Wvmh+y+l
maker-scaffold06646-augustus-gene-0.12-mRNA-1 77 nYGRQRKPEKTNWVMHQYHL 96
6589**************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MYGIFLFVIT RVSKDGQIRH FFHRPSKAYT TGTRKRRKVH TDEDGSETRW HKTGKTRPVF 60
VGGAVKGYKK ILVLYTNYGR QRKPEKTNWV MHQYHLGNNE EEKDGELVVS KVFYQTQPRQ 120
CGSSIKDSLN NQSVHDNSPN EIPIPKNPTA LLEYYNTPFI NYDQGGHNRE SPPQLIPNLV 180
VQGDGSSFVR LAADTSKGKF ERK
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers. Is a direct target of SND1. {ECO:0000269|PubMed:18952777}. |
