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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold06551-augustus-gene-0.9-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 290aa MW: 32355.2 Da PI: 6.3031 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold06551-augustus-gene-0.9-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 29 | 61 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32
+g+W++eEd l+++ +q+G+g +W + +++ g
maker-scaffold06551-augustus-gene-0.9-mRNA-1 29 KGPWSPEEDATLKRYLEQHGTGgNWIALPHKAG 61
79********************9*988777766 PP
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2 | Myb_DNA-binding | 23.3 | 1.5e-07 | 99 | 120 | 24 | 46 |
HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
W+ Ia+ ++ gRt++++k++w++
maker-scaffold06551-augustus-gene-0.9-mRNA-1 99 WSVIASQLP-GRTDNDIKNYWNT 120
*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MSRKNAISFT AITLAMGRAP CCDKANVKKG PWSPEEDATL KRYLEQHGTG GNWIALPHKA 60 GLFPAEHYIA EMAELSQAGY QAWRFYRGRR QHYLHSLWWS VIASQLPGRT DNDIKNYWNT 120 KLKKKLLAAG NACPKSATTN RSPDETSNGI SHLNLVEISA SIPKAENYDY GSSSCFYTNS 180 NTLMRTPLVE ANNMENCDLD CIILDPSQFH VSRPMQVPDF RTSGSESYNT ITTSSQDVVG 240 LSPSSTLALE NNYSLLSCNG GVNDDGLLMD FQFESHDDDL LDGFVFRKIY
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