PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold06470-augustus-gene-0.10-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family NZZ/SPL
Protein Properties Length: 316aa    MW: 33924.3 Da    PI: 9.2381
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold06470-augustus-gene-0.10-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE33.87.1e-112618934183
                                         NOZZLE  34 eirtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisn 97 
                                                    e ++ t k+rgrkp    +q+kq     rg+gva+ler +i+e  kk++              +
  maker-scaffold06470-augustus-gene-0.10-mRNA-1  26 ETKSPTSKTRGRKPSKGPTQKKQ---PQRGLGVAQLERLRIQERWKKMTEFPSCPPDPQ-PPLQ 85 
                                                    6677799*******766655444...46********************65544433321.2223 PP

                                         NOZZLE  98 tatrlpvpvdrgvvlqgfps..................slgssri..lcggvgsgqvmidp... 138
                                                      t +  p  +  v    p                     g+s +    g + s qv+++p   
  maker-scaffold06470-augustus-gene-0.10-mRNA-1  86 CQTPFMSPFTEHHVSGSVPVqycapappssvvngscgaGNGGSGFggTFGMMMSDQVVLNPyag 149
                                                    3344444444444444444444445566676666333333334442234555688888888444 PP

                                         NOZZLE 139 ..vispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldg 183
                                                      v  p  f+ets    elss++n q    s  + cd c+ kkr++ 
  maker-scaffold06470-augustus-gene-0.10-mRNA-1 150 igVPDPRVFIETSR---ELSSMPNLQ----SVPHNCDLCLLKKRFNK 189
                                                    44457899***998...*******98....66788*********874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087443.7E-921189IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MATTSTNRTP LFLMASHPNM NTVYEETKSP TSKTRGRKPS KGPTQKKQPQ RGLGVAQLER  60
LRIQERWKKM TEFPSCPPDP QPPLQCQTPF MSPFTEHHVS GSVPVQYCAP APPSSVVNGS  120
CGAGNGGSGF GGTFGMMMSD QVVLNPYAGI GVPDPRVFIE TSRELSSMPN LQSVPHNCDL  180
CLLKKRFNKG KIGFDGGRDQ NSEISPISGS GFHGSNLENI PNFTSNFGAT APRHATRNLD  240
QGVEVVAIHR KGNSMGGSVF MEYEFFPGKS GRGTSSKGLE LPREASVAVG GEPSYPTTTA  300
YCATSSSVDL SLKLSY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023929272.11e-174uncharacterized protein LOC112040621
TrEMBLA0A2N9EZH51e-110A0A2N9EZH5_FAGSY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83651723