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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold06155-augustus-gene-0.11-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
TALE |
Protein Properties |
Length: 366aa MW: 41364.6 Da PI: 6.6083 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold06155-augustus-gene-0.11-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 28.6 | 2.4e-09 | 294 | 328 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++++ LA+++gL+++q+ +WF N+R ++
maker-scaffold06155-augustus-gene-0.11-mRNA-1 294 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 328
569*****************************885 PP
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2 | ELK | 41.1 | 3.7e-14 | 248 | 269 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK qLlrKYsgyLgsLkqEF+
maker-scaffold06155-augustus-gene-0.11-mRNA-1 248 ELKGQLLRKYSGYLGSLKQEFM 269
9********************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009934 | Biological Process | regulation of meristem structural organization |
GO:0048440 | Biological Process | carpel development |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MESGSNGTSC MMAFGENSSN GLCPMMMMMP LMTSHHSHHH PNADTNSLFL PLPPNNNHDH 60 QNQNRNTPTP TTNINNSSSF ILDDHNANSN TGLFFMESNN NEGSSSSVKA KIMAHPHYHR 120 LLAAYANCQK VLNKQVGAPP EVVARLEQAC STAANMGHSA STGCIGEDPA LDQFMEAYCE 180 MLTKYEQELS KPFKEAMLFL QRIECQFKAL AVSSSDSACV EAVDRNVSSE EEVDVNNNFI 240 DPQAEDRELK GQLLRKYSGY LGSLKQEFMK KRKKGKLPKE ARQQLLDWWS RHYKWPYPSE 300 SQKLALAEST GLDQKQINNW FINQRKRHWK PSEDMQFVVM DATHPHYYMD NVLGNPFPMD 360 ISPALL
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 263 | 272 | LKQEFMKKRK |
2 | 269 | 273 | KKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator involved in early embryonic development. Probably binds to the DNA sequence 5'-TGAC-3'. |