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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
maker-scaffold05987-augustus-gene-0.18-mRNA-1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
MYB |
| Protein Properties |
Length: 319aa MW: 35942.1 Da PI: 6.1693 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold05987-augustus-gene-0.18-mRNA-1 | genome | THGP | View Nucleic Acid |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 46.8 | 6.7e-15 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEd++l ++ G g+W+ +ar g+ R++k+c++rw +yl
maker-scaffold05987-augustus-gene-0.18-mRNA-1 22 KGLWSPEEDDKLMNYMMNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 69
678*******************************************97 PP
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| 2 | Myb_DNA-binding | 47.2 | 5.1e-15 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+ +++++ +lG++ W+ Ia++++ gRt++++k++w++
maker-scaffold05987-augustus-gene-0.18-mRNA-1 75 RGAFSPQEEAHIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 118
89********************.*********.***********97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 319 aa
Download sequence Send
to blast |
MRKPELSSVG KNNHVNNNKL RKGLWSPEED DKLMNYMMNN GQGCWSDVAR NAGLQRCGKS 60
CRLRWINYLR PDLKRGAFSP QEEAHIIHLH SLLGNRWSQI AARLPGRTDN EIKNFWNSTI 120
KKRLKNFSST PSPNTSDSSS PKDVMGGLIS MQEQGIMPLY LDSSSSTTNS MQAMTLNHMI 180
DPLPMIHHGL NMSNNASGYF NAAPQYMTQI GVNGDSFYGG NGVFGGADMG LENELFVPPL 240
ESISIEENDK TENMYNKRTM NNNTSNNLNN ISNCSNNNNR AENLARVGNY WEGEELRMGE 300
WDFEELMDVP SFPLLDFSN
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