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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
maker-scaffold05469-snap-gene-0.9-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 325aa MW: 37262.9 Da PI: 7.0056 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold05469-snap-gene-0.9-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 56.3 | 1.1e-17 | 12 | 59 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
lppGfrFhP+deel+++yL++kv++++l++ ++i+e+d+yk++Pw+Lp+
maker-scaffold05469-snap-gene-0.9-mRNA-1 12 LPPGFRFHPSDEELIQHYLRNKVTSSPLPA-SIIAEIDLYKYNPWELPM 59
79****************************.89**************94 PP
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| 2 | NAM | 62.6 | 1.2e-19 | 60 | 116 | 73 | 128 |
NAM 73 rknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
r+nra+ gyWkatg+dk+ l++ +++ +g+kk L+fykgr pkg+ktdW+mheyr
maker-scaffold05469-snap-gene-0.9-mRNA-1 60 RPNRAAGLGYWKATGTDKPTLTScGTKSIGVKKALAFYKGRPPKGVKTDWIMHEYRS 116
89*****************999978889***************************95 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MENQQPTSDI RLPPGFRFHP SDEELIQHYL RNKVTSSPLP ASIIAEIDLY KYNPWELPMR 60
PNRAAGLGYW KATGTDKPTL TSCGTKSIGV KKALAFYKGR PPKGVKTDWI MHEYRSSLDT 120
MIWTAKAKGS MRLDDWVLCR VRQKCGVLRN VREDRYGPSY EPPVYVQKVD EPWSMNVHPT 180
LFAAVRNYLY NDCSMLPYFF ASQKIPCTDT TANISFQSNN GGKLYPKDDT AINQSQYLAS 240
FNSLIFVFPS KKVSNKDNEE VEISQRNDST AGMKFCGTDP PQDNDFDAAH EWSSFNPYQE 300
LDDQFVFTES SNKLEQWREG YVANY
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