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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold05156-augustus-gene-0.10-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
B3 |
Protein Properties |
Length: 315aa MW: 36034.5 Da PI: 10.0079 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold05156-augustus-gene-0.10-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 46.9 | 5.1e-15 | 22 | 75 | 41 | 98 |
TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 41 esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
++W+v + + +++ +++kGW+ Fv++n Lk gDf++F++dg+s+f vk++
maker-scaffold05156-augustus-gene-0.10-mRNA-1 22 GPRKTWRVDV--KEVDSSLFFQKGWSAFVRDNSLKMGDFLLFRYDGNSNF--SVKIYG 75
3459******..999999****************************9999..666654 PP
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2 | B3 | 40.4 | 5.2e-13 | 218 | 312 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEE..E-T CS
B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryv..ltk 63
+ p +v+ s+ l +p +f++ +++ k ++ +tl++++g W+++l +y+++ g+++ l++
maker-scaffold05156-augustus-gene-0.10-mRNA-1 218 VLMYPCYVN-SDYLNVPTSFFKIYMEGK--QRNVTLQTSDG-LWTMRLvRYSNRVGKFYgkLKQ 277
444444555.566********8886443..44689888555.799999444555555543388* PP
THHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 64 GWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
GW F+ n L +gD++vF+l++++++ ++v+vf+
maker-scaffold05156-augustus-gene-0.10-mRNA-1 278 GWHAFAIGNALIVGDVCVFELIDKTGGLFKVSVFK 312
**********************9988878888875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
RIPEAFVKYF DGEVPNSSVL WGPRKTWRVD VKEVDSSLFF QKGWSAFVRD NSLKMGDFLL 60 FRYDGNSNFS VKIYGRDCCE KGVAGASRKS YTPVYGNGKE EKEKMRNYLK RKSEKLLVGT 120 GENEEKKKRG YHQKMKREKL LVSTGTNEVD TKEIEVIYID SDANDDNIGK CMGSIRKERT 180 GIEVIPRHLS YKPPKMKKGA RALEAASKFI SNYPSFQVLM YPCYVNSDYL NVPTSFFKIY 240 MEGKQRNVTL QTSDGLWTMR LVRYSNRVGK FYGKLKQGWH AFAIGNALIV GDVCVFELID 300 KTGGLFKVSV FKCSS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 109 | 128 | KRKSEKLLVGTGENEEKKKR |