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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold04891-snap-gene-0.29-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB_related |
Protein Properties |
Length: 146aa MW: 17112.1 Da PI: 10.9677 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold04891-snap-gene-0.29-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.1 | 2.7e-15 | 17 | 63 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r+rWT+eE+++++ + k+lG g+Wk I++++ ++R++ q+ s+ qky
maker-scaffold04891-snap-gene-0.29-mRNA-1 17 RKRWTEEEHKIFLIGLKKLGRGDWKGISQKFVTTRSPSQVASHAQKY 63
89********************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MKKKSCVDLV FAKKDRRKRW TEEEHKIFLI GLKKLGRGDW KGISQKFVTT RSPSQVASHA 60 QKYFLRKATI DKKKPRSSVF DVSLTEPVIF LSPSLLLYCS ITHIFQRCNY NHHNRASISA 120 RMSLNLKLDI LIPTPEQRYP LRRQEP
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 1 | 18 | KKKSCVDLVFAKKDRRKR |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |