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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold04568-augustus-gene-0.12-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
HD-ZIP |
Protein Properties |
Length: 323aa MW: 36755.9 Da PI: 7.1428 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold04568-augustus-gene-0.12-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.1 | 3.1e-18 | 77 | 129 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k
maker-scaffold04568-augustus-gene-0.12-mRNA-1 77 KKRLSLEQVKALEKSFEIGNKLEPERKMHLAKALGLQPRQIAIWFQNRRARWK 129
556899**********************************************9 PP
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2 | HD-ZIP_I/II | 129.7 | 1.2e-41 | 75 | 165 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdye 64
ekk+rls eqvk+LE+sFe +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdye
maker-scaffold04568-augustus-gene-0.12-mRNA-1 75 EKKKRLSLEQVKALEKSFEIGNKLEPERKMHLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYE 138
69************************************************************** PP
HD-ZIP_I/II 65 aLkraydalkeenerLekeveeLreel 91
+Lk++++alk++n++L++++++L++e+
maker-scaffold04568-augustus-gene-0.12-mRNA-1 139 VLKKQFEALKADNDNLQTQNKKLTAEV 165
***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MAFPTSHGFM FQTHEDQDHL PSSNTFPSCP PQHYHGAVPF MMKRSMSFSG IDNNKCEEVV 60 HGDDELSDDG SQLGEKKKRL SLEQVKALEK SFEIGNKLEP ERKMHLAKAL GLQPRQIAIW 120 FQNRRARWKT KQLEKDYEVL KKQFEALKAD NDNLQTQNKK LTAEVIVSIP TGPNGFSLAS 180 LFIYLNRMLI KYSHSDLLLL RLDLIAFIVM LQLLALKNRD TNEVGVKCIK KEAEGSWSNG 240 SENSCDINLD ISRTPVMNSP VSSQLSSHHL FPSSLRPTSM TQLLQGSSRP DLQSLKIDHM 300 AQDESLCNMF TGIEDQHNFW PWP
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 123 | 131 | RRARWKTKQ |