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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold04251-augustus-gene-0.18-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
B3 |
Protein Properties |
Length: 246aa MW: 27193.1 Da PI: 8.2171 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold04251-augustus-gene-0.18-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 48.3 | 1.8e-15 | 52 | 140 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTH CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGW 65
k + ps+v +l lp +f++ + +++ ++ +tl de+g ++ + rk++ l++GW
maker-scaffold04251-augustus-gene-0.18-mRNA-1 52 TKSMQPSHVAGGFWLGLPVDFCKLN-LPS-RDDVMTLIDEDGDEYPTIYLARKRG----LSGGW 109
58899*****************666.443.4558***************555555....9**** PP
HHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 66 keFvkangLkegDfvvFkldgrsefelvvkvfr 98
k+F+ a++L gD vvF+l+gr++f +v ++r
maker-scaffold04251-augustus-gene-0.18-mRNA-1 110 KGFAVAHHLVHGDAVVFQLIGRTTF--KVYIIR 140
*********************9988..888877 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 246 aa
Download sequence Send
to blast |
VAVDRVAIPR RIFGRQRSLT NLVLASPEAI AEADEKAEKL VSGLPPSYPI LTKSMQPSHV 60 AGGFWLGLPV DFCKLNLPSR DDVMTLIDED GDEYPTIYLA RKRGLSGGWK GFAVAHHLVH 120 GDAVVFQLIG RTTFKVYIIR VNDEAGQTPC GTETSGRGQE VHSLCQQACT YIQRSESVNH 180 FVAMDRVAMP RRIFGRKRSL SNLVLASSEA VAEAKEKAEN YYGVYHLVVQ YLKSQCSHPM 240 SLVDFG
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