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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold04107-augustus-gene-0.9-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
NAC |
Protein Properties |
Length: 391aa MW: 44524.5 Da PI: 6.2911 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold04107-augustus-gene-0.9-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 163.4 | 8.3e-51 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFs 62
+ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++ k+ + +++wyfFs
maker-scaffold04107-augustus-gene-0.9-mRNA-1 15 VPPGFRFHPTEEELLQYYLRKKVSYEKIDL-DVIRDVDLNKLEPWDIQEvcKIGTtPQNDWYFFS 78
69****************************.9***************953433332456****** PP
NAM 63 krdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
++dkky+tg+r+nrat++g+Wkatg+dk +ls + + +g++ktLvfy+grap+g k+dW+mheyr
maker-scaffold04107-augustus-gene-0.9-mRNA-1 79 HKDKKYPTGTRTNRATTAGFWKATGRDKVILS-NCRRIGMRKTLVFYRGRAPHGLKSDWIMHEYR 142
********************************.8889***************************9 PP
NAM 128 l 128
l
maker-scaffold04107-augustus-gene-0.9-mRNA-1 143 L 143
8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009809 | Biological Process | lignin biosynthetic process |
GO:0009834 | Biological Process | plant-type secondary cell wall biogenesis |
GO:0009901 | Biological Process | anther dehiscence |
GO:0010047 | Biological Process | fruit dehiscence |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MPENMSISVN GQSQVPPGFR FHPTEEELLQ YYLRKKVSYE KIDLDVIRDV DLNKLEPWDI 60 QEVCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATTAGFWK ATGRDKVILS NCRRIGMRKT 120 LVFYRGRAPH GLKSDWIMHE YRLDDNVTDT DISNAMGEAS QEEGWVVCRI FKKKNLHKTL 180 DSPMSSSFTA ETRSQMFDSC NGGALEQMLQ YVGNGKEEEM NEAKSSARTY LRPIETGMKN 240 GYHERFMKLP SLESPNSTSS QCYYQHNIHP EMIIENEGSS VTNPNSVYNQ MDSAALTNWA 300 ALDRLVASQL NGQTEASRQL ACFNDPTNTM PYCSTDHDLQ FSTLRSSSSS SNRSYHPTQD 360 YNSEIDLWSF ARSSSSFSSS DDPLCHVSNA P
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues. {ECO:0000269|PubMed:16214898, ECO:0000269|PubMed:17237351, ECO:0000269|PubMed:17333250}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Gondolf VM, et al.
A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis. BMC Plant Biol., 2014. 14: p. 344 [PMID:25492673] - Jaradat MR,Ruegger M,Bowling A,Butler H,Cutler AJ
A comprehensive transcriptome analysis of silique development and dehiscence in Arabidopsis and Brassica integrating genotypic, interspecies and developmental comparisons. GM Crops Food, 2014. 5(4): p. 302-20 [PMID:25523176] - Yuan Y,Teng Q,Zhong R,Ye ZH
TBL3 and TBL31, Two Arabidopsis DUF231 Domain Proteins, are Required for 3-O-Monoacetylation of Xylan. Plant Cell Physiol., 2016. 57(1): p. 35-45 [PMID:26556650] - Yang C, et al.
Transcription Factor MYB26 Is Key to Spatial Specificity in Anther Secondary Thickening Formation. Plant Physiol., 2017. 175(1): p. 333-350 [PMID:28724622] - Pascual MB, et al.
PpNAC1, a main regulator of phenylalanine biosynthesis and utilization in maritime pine. Plant Biotechnol. J., 2018. 16(5): p. 1094-1104 [PMID:29055073] - Liu C,Yu H,Li L
SUMO modification of LBD30 by SIZ1 regulates secondary cell wall formation in Arabidopsis thaliana. PLoS Genet., 2019. 15(1): p. e1007928 [PMID:30657769]
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