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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold03547-augustus-gene-0.16-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
NAC |
Protein Properties |
Length: 149aa MW: 17093.6 Da PI: 10.357 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold03547-augustus-gene-0.16-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 131.4 | 6.7e-41 | 15 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskr 64
lp G+rF+Ptdeelvv+yLk+kv + ++++ +vi+e+d+++++Pw Lp + +++ yfFs+r
maker-scaffold03547-augustus-gene-0.16-mRNA-1 15 LPIGYRFRPTDEELVVHYLKRKVFSIPFPA-SVIPEFDVFQTDPWGLPGDL---NEKRYFFSSR 74
699***************************.99***************544...4678****98 PP
NAM 65 dkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
++ ++++++ra+ sgyWk gkdk++l++ ++++vg++k L+f +g+++ g+kt+Wvmheyr
maker-scaffold03547-augustus-gene-0.16-mRNA-1 75 KSV--NENKSKRAAGSGYWKPIGKDKQILASgSNQAVGMRKALMFCEGKRSYGTKTRWVMHEYR 136
776..567999******************9966778***************************9 PP
NAM 128 l 128
l
maker-scaffold03547-augustus-gene-0.16-mRNA-1 137 L 137
8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 149 aa
Download sequence Send
to blast |
MDQRPNFVIQ GGFKLPIGYR FRPTDEELVV HYLKRKVFSI PFPASVIPEF DVFQTDPWGL 60 PGDLNEKRYF FSSRKSVNEN KSKRAAGSGY WKPIGKDKQI LASGSNQAVG MRKALMFCEG 120 KRSYGTKTRW VMHEYRLVGS ETNAYSTQV
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-33 | 13 | 149 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-33 | 13 | 149 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-33 | 13 | 149 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-33 | 13 | 149 | 15 | 154 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swm_B | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swm_C | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swm_D | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swp_A | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swp_B | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swp_C | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
3swp_D | 1e-33 | 13 | 149 | 18 | 157 | NAC domain-containing protein 19 |
4dul_A | 1e-33 | 13 | 149 | 15 | 154 | NAC domain-containing protein 19 |
4dul_B | 1e-33 | 13 | 149 | 15 | 154 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |