 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold03184-snap-gene-0.22-mRNA-1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
Family |
C2H2 |
Protein Properties |
Length: 362aa MW: 39661.6 Da PI: 6.4995 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold03184-snap-gene-0.22-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 22.8 | 2.3e-07 | 164 | 185 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C++Cgk F+r nL+ H+r H
maker-scaffold03184-snap-gene-0.22-mRNA-1 164 FCEICGKGFKRDANLRMHMRAH 185
6*******************99 PP
|
2 | zf-C2H2 | 11.8 | 0.00077 | 262 | 278 | 5 | 21 |
TTTEEESSHHHHHHHHH CS
zf-C2H2 5 dCgksFsrksnLkrHir 21
Cg+sFsrk+ L H+
maker-scaffold03184-snap-gene-0.22-mRNA-1 262 TCGTSFSRKDKLFGHMT 278
6**************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MFNTGESYRI PAGYSAGLGH NPGQNRVGSS DSRVPLLNLS TVRTRMDSLQ RFLSDTVNRN 60 HLISQDQMDM VSTEIVSAIH QIIVNGAALL SCSQTSDLTA AAAPAEIATP SSTTPPKLAA 120 DSSVPLKVEA SDSDDFKVEN SFLDSDSEIV ELDAVELLAE HIHFCEICGK GFKRDANLRM 180 HMRAHGNHRH TKFSCPYDGC NRNKSHKKFR PLKSVICVKN HFKRSHCPKM YSCNRCNKKS 240 FSVVADLKNH LKHCGEARWK CTCGTSFSRK DKLFGHMTLF EGHMPAVGGD DNECPKIAPD 300 SSAAVTAMEE DDEEVVMGSG SGSDNGLLFD GLLDDFGGSI ESYYCFQDML GSPQLNGMEL 360 NL
|