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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold03034-snap-gene-0.19-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
B3 |
Protein Properties |
Length: 367aa MW: 41985.5 Da PI: 5.9387 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold03034-snap-gene-0.19-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 39.1 | 1.4e-12 | 19 | 110 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeF 68
ffk+ +ps +++ l++p kf+ ++g + s+ tl ++g +W+v l k ++++ ++W++F
maker-scaffold03034-snap-gene-0.19-mRNA-1 19 FFKIILPSTIENKK-LRIPPKFMLDFGDE--LSTSATLIVPNGGTWKVGL--LKAEWSIWFCECWEDF 81
78888777777666.********999866..8899***************..999999********** PP
HHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 69 vkangLkegDfvvFkldgrsefelvvkvfrk 99
v+ + +vF+++++s+f +v +f++
maker-scaffold03034-snap-gene-0.19-mRNA-1 82 VEFYSISIEHLLVFRYERNSNF--HVVLFDT 110
*****************99999..9998886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MEPKASPSRS STSQSPSHFF KIILPSTIEN KKLRIPPKFM LDFGDELSTS ATLIVPNGGT 60 WKVGLLKAEW SIWFCECWED FVEFYSISIE HLLVFRYERN SNFHVVLFDT TATETQYPSN 120 NNVNLEDIVD LTELDEINIS RQYKQSSDTS SKGRERAIGA AKISMPKGRS FMVVMQSIPP 180 KFVLDFGDEL STSVTLIVPN GGTWKEDFVE FYSISVGHLL VFRYERNSNF HVVIFDTTAT 240 ETQYPSNNNV NLEDTVDLTE LDEINISSQY NQPSDTSSKG RERAIGAAKI FMPKGRSFMA 300 VMQSYNIWLN YVYVPKEFVD KHIAWNQFVD LQTCGEKQWR VQCYCHTATS SAMRMGKRWA 360 AFSTKNI
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