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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
maker-scaffold03016-augustus-gene-0.16-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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| Family |
NAC |
| Protein Properties |
Length: 343aa MW: 39004.6 Da PI: 4.5551 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold03016-augustus-gene-0.16-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 181.4 | 2.2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFs 62
lppGfrFhPtdeelv +yL++k++g ++el e+i+evd+yk+ePwdLp k + +++ ewyf+s
maker-scaffold03016-augustus-gene-0.16-mRNA-1 6 LPPGFRFHPTDEELVAYYLHRKINGGTIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDMEWYFYS 68
79****************************.99**************95345556888****** PP
NAM 63 krdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
+rd+ky++g+r+nrat++gyWkatgkd++v+s +++ vg+kktLv+y+grap+g +t+Wvmhey
maker-scaffold03016-augustus-gene-0.16-mRNA-1 69 PRDRKYPNGSRTNRATRAGYWKATGKDRPVHS-HKHPVGMKKTLVYYRGRAPHGIRTNWVMHEY 131
********************************.999**************************** PP
NAM 127 rl 128
rl
maker-scaffold03016-augustus-gene-0.16-mRNA-1 132 RL 133
98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MAPMSLPPGF RFHPTDEELV AYYLHRKING GTIELEIIPE VDLYKCEPWD LPEKSFLPSK 60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS HKHPVGMKKT LVYYRGRAPH 120
GIRTNWVMHE YRLIDSMCSS SASSSLKDSY ALCRIFKKTI QIPKAKEKEQ TENLENGNPV 180
SALDEQLLGD DTSGLETFQG REAEDENFIQ DYSKFPSDTS SSDLTQGTPA ETGIADDLQA 240
PFASDEANSA ANLYSLGVDY PSNLIQDMQI QSYTSLDYQL PYPPLELEDF PQINLTETKP 300
VKPEIIDEYM SYDKIRDCMN GTLEEIFSLC SSLDNPVALS LQE
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-58 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-58 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-58 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-58 | 1 | 158 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 5e-58 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 5e-58 | 1 | 158 | 12 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 5e-58 | 1 | 158 | 12 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC045, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
