 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold02883-augustus-gene-0.26-mRNA-1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
Family |
C2H2 |
Protein Properties |
Length: 309aa MW: 33784.2 Da PI: 4.4223 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold02883-augustus-gene-0.26-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14.9 | 7.5e-05 | 282 | 305 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C++sF++ L++H + H
maker-scaffold02883-augustus-gene-0.26-mRNA-1 282 FPCSLCNRSFNSEIGLQSHTKAkH 305
89*****************99877 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0005730 | Cellular Component | nucleolus |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MEFWGAEVKS GEPFEVYPGD GFILHLSQAC LGEVKKNIGN ESVCLFVKVD KQKLVLGTLS 60 SENFPQLSFD LVFEKKFELS HNWKNGTGLI TWFFLLLYVI SLTDICIVIT GEVSDSEEDF 120 PVVTHNSGKY ESQAKPAAKP DGTAAKRVKI VEPNKDEDMD EDDVDKDASS NDDSSDEDDV 180 NEAKAKVNGE EEFSEDDDSS DDEDSSEDED EETPMKANAS KKRPLESAQK TPVPDKKAKL 240 VTPENTEFIA ADGKKGGGHV ATPHPSKKAA TKQQTPKSGG AFPCSLCNRS FNSEIGLQSH 300 TKAKHSDGK
|