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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold02642-snap-gene-0.29-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 355aa MW: 39356.3 Da PI: 5.8469 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold02642-snap-gene-0.29-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.8 | 1.8e-16 | 25 | 70 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W+ eEd +l ++v ++G ++W++Iar++ gR++k+c++rw +
maker-scaffold02642-snap-gene-0.29-mRNA-1 25 KGPWSLEEDAILSRLVSKFGARNWTLIARRIA-GRSGKSCRLRWCNQ 70
79******************************.***********985 PP
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2 | Myb_DNA-binding | 58.3 | 1.7e-18 | 77 | 121 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r+++T eEd+ +v a++ +G++ W++Iar ++ gRt++ +k++w++
maker-scaffold02642-snap-gene-0.29-mRNA-1 77 RKPFTDEEDQMIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 121
789*******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MEREREVEEE EEEITVVVEG RDKVKGPWSL EEDAILSRLV SKFGARNWTL IARRIAGRSG 60 KSCRLRWCNQ LDPTVKRKPF TDEEDQMIVA AHAIHGNKWA AIARLLPGRT DNAIKNHWNS 120 TLKRRRMGVG KIKSESCNMV DDSLEKTKAS SEETLSCGDV NSFKSLEGRD MSSLEDMDDQ 180 NEDKVPIEGH FSHEDIDQST LFRPVARISA LAPVPMQGPL VQASKPDVDI CKLFEGVCGE 240 RLVPHNCGHG CCGTQNDRIP RSSLLGPEFV EFSESPSFPS LELAAIATDI SKLAWLKSGL 300 ENSSVRAIDD AAGGIKSHGS QVQTRHLEES RVNGHFCFDE GNSRLTGMKT NVLST
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Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid. {ECO:0000269|PubMed:16463103}. |