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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold01927-augustus-gene-0.11-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
LBD |
Protein Properties |
Length: 171aa MW: 18485.1 Da PI: 8.3842 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold01927-augustus-gene-0.11-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 146.4 | 7.9e-46 | 13 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvye 64
+CaaCk+lrr+Ca+dCv+apyfpa++p+kfanvhk+FGasnv k+l++lp ++r da+ss+vye
maker-scaffold01927-augustus-gene-0.11-mRNA-1 13 PCAACKLLRRRCAQDCVFAPYFPADDPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYE 76
7*************************************************************** PP
DUF260 65 AearardPvyGavgvilklqqqleqlkaelallkee 100
A+ar+rdPvyG+vg i++lqqq++ l+++lal+++e
maker-scaffold01927-augustus-gene-0.11-mRNA-1 77 ANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAE 112
*******************************99976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MKESGRKQGA PSPCAACKLL RRRCAQDCVF APYFPADDPQ KFANVHKVFG ASNVNKMLQE 60 LPVHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID VLQTQLALAQ AEVVHLRVRQ 120 TASMPNHGVG PGSPSSSGSP SSRLMGSQVK PIFDMDMVVD QAHLGESMWS C
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