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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold01705-snap-gene-0.24-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
C2H2 |
Protein Properties |
Length: 508aa MW: 55412.9 Da PI: 8.6664 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold01705-snap-gene-0.24-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 16.6 | 2.1e-05 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C+k F r nL+ H r H
maker-scaffold01705-snap-gene-0.24-mRNA-1 79 FVCEICSKGFQRDQNLQLHRRGH 101
89*******************88 PP
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2 | zf-C2H2 | 12.7 | 0.00038 | 155 | 177 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+kC++C+k + +s+ k H +t+
maker-scaffold01705-snap-gene-0.24-mRNA-1 155 WKCEKCSKKYAVQSDWKAHSKTC 177
58*****************9998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 508 aa
Download sequence Send
to blast |
MSNITGGEAG SFSSGNTGGE EVQQQDEQLN HYDPNNGSTT QQQQQAPPAK KKRNLPGTPD 60 PSAEVIALSP TTLMATNRFV CEICSKGFQR DQNLQLHRRG HNLPWKLKQR TTTEIRKRVY 120 VCPESSCVHH NPARALGDLT GIKKHFCRKH GEKKWKCEKC SKKYAVQSDW KAHSKTCGTR 180 EYKCDCGTIF SRRDSFITHR AFCDALSEEN NKAKQGLLSN MGQNLPGQVH PQLMSSIPIN 240 NNNNSNTTSG TSGFNQSDTK VPISLPQDIM SFSTNKPLNM VGSLFSGPRS ISSSSPSLQL 300 NTNSSSSIFE GNGHQLAGLA AHMPATALLQ KAAQMGATVS TSGMNCQVMQ NNSFGTSMAP 360 PSFSAIQPQN DQSFINQFIQ KGQHGNSYEN GMPDNLGMTN MGMLSGLLDQ NSALLKNIKH 420 DNSNSNSTVL HGGDSKAGLS SSIKESNGSE DMMTLDFLGI GGGARHGNFY ELQQQKQQEM 480 GFEGIGQRIQ GLSHFQQQAS MEKPMWEV
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as a positive regulator of gibberellin (GA) action, homeostasis and signaling. GA converts the GAF1 complex from transcriptional activator to repressor via the degradation of DELLA proteins. {ECO:0000269|PubMed:25035403}. |