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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold01655-augustus-gene-0.20-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
NAC |
Protein Properties |
Length: 344aa MW: 38832.5 Da PI: 6.5129 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold01655-augustus-gene-0.20-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 181.3 | 2.5e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskr 64
lppGfrFhPtdeel+++yL +kv + ++++ +i evd++k+ePwdLp ++k +ekewyfF+ r
maker-scaffold01655-augustus-gene-0.20-mRNA-1 16 LPPGFRFHPTDEELITHYLSPKVLDANFST-VAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCVR 78
79*************************999.67***************888999********** PP
NAM 65 dkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
d+ky+tg r+nrat++gyWkatgkdke+++ +++lvg+kktLvfykgrapkgek++Wvmheyrl
maker-scaffold01655-augustus-gene-0.20-mRNA-1 79 DRKYPTGLRTNRATDAGYWKATGKDKEIYK-GKALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 141
*****************************9.99******************************8 PP
NAM 129 e 129
e
maker-scaffold01655-augustus-gene-0.20-mRNA-1 142 E 142
5 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
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to blast |
MENVSTTAKE DEQIELPPGF RFHPTDEELI THYLSPKVLD ANFSTVAIGE VDLNKCEPWD 60 LPWRAKMGEK EWYFFCVRDR KYPTGLRTNR ATDAGYWKAT GKDKEIYKGK ALVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKYSGYNL PKTARNEWVI CRVFNKTSGG KKNHISGLMK 180 LSSYANESCP SLLPPLMDSS PYNSETRTGA GETSHGTCFS NPMEDHKTKE RMVDNFNTGL 240 LAASSSLSPS YISSAPNSDY CTNMGNLQYS DTALMQDQLF RMLFENHAGN MKQNMKAEFS 300 SETGFSADMS SVVSNHDMAR RSFEDQDDPS NSGGPVDIDC LWNY
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 7e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 7e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 7e-55 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 7e-55 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |