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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
maker-scaffold01546-augustus-gene-0.28-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 243aa MW: 27756.5 Da PI: 4.5255 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold01546-augustus-gene-0.28-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.2 | 1.6e-19 | 35 | 89 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++f++eq++ Le++Fe+++ + +++ eLA++lgL+ rqV +WFqN+Ra++k
maker-scaffold01546-augustus-gene-0.28-mRNA-1 35 KNKRRFSDEQIKSLETMFESESRLEPRKKLELARELGLQPRQVAIWFQNKRARWK 89
67789*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 120.5 | 8.5e-39 | 36 | 127 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyea 65
+krr+s+eq+k+LE++Fe+e++Lep++K elareLglqprqva+WFqn+RAR+k+k+lE+dy++
maker-scaffold01546-augustus-gene-0.28-mRNA-1 36 NKRRFSDEQIKSLETMFESESRLEPRKKLELARELGLQPRQVAIWFQNKRARWKSKNLERDYST 99
79************************************************************** PP
HD-ZIP_I/II 66 LkraydalkeenerLekeveeLreelke 93
L+ y+ l++ e+L+ke+++L +l++
maker-scaffold01546-augustus-gene-0.28-mRNA-1 100 LRGDYNDLASTFEALKKEKQALVVQLQK 127
***********************99986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MLDHSEYSPS AVVAAESFGC MDMDSHTTSR KKKSKNKRRF SDEQIKSLET MFESESRLEP 60
RKKLELAREL GLQPRQVAIW FQNKRARWKS KNLERDYSTL RGDYNDLAST FEALKKEKQA 120
LVVQLQKLND LMQRPQEERQ CCSEGVAANS TQDELDNGDT NKCESETKPS LSTERSEHGG 180
GVLSDEDSNI KAEYFTLEDE PSLLDMVEPA DGSLTSTEDW SSLNSDGLFD QSNGNSQWWD 240
FWS
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}. |
