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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold01193-augustus-gene-0.35-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
LBD |
Protein Properties |
Length: 165aa MW: 18393 Da PI: 6.8947 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold01193-augustus-gene-0.35-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 142.9 | 9.9e-45 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvye 64
+Ca+Ck+lrr+CakdC++apyfp+++++kfa+vhk+FGasnv+k+l++lp ++r da+sslvye
maker-scaffold01193-augustus-gene-0.35-mRNA-1 6 PCASCKLLRRRCAKDCIFAPYFPSDDTHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYE 69
7*************************************************************** PP
DUF260 65 AearardPvyGavgvilklqqqleqlkaelallkee 100
A+ar+rdPvyG+vg i+ lq+q++ql+ +la++++e
maker-scaffold01193-augustus-gene-0.35-mRNA-1 70 ANARVRDPVYGCVGAISFLQNQVSQLEMQLAVAQAE 105
*******************************99987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 165 aa
Download sequence Send
to blast |
MGGSSPCASC KLLRRRCAKD CIFAPYFPSD DTHKFAIVHK VFGASNVSKM LQELPVHQRA 60 DAVSSLVYEA NARVRDPVYG CVGAISFLQN QVSQLEMQLA VAQAEILCIQ MQQEPNLPTH 120 QIDQVDKSFL LSTNNFDNNN IPQYLSFASS SNVIQDPLKR ESLWT
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