 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
maker-scaffold00747-snap-gene-0.55-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
| Family |
CPP |
| Protein Properties |
Length: 218aa MW: 24172.6 Da PI: 8.1669 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold00747-snap-gene-0.55-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 52.4 | 1.1e-16 | 31 | 70 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
k++kgCnCkk+ ClkkYCeCf+a++ Cse+CkC dCkN e
maker-scaffold00747-snap-gene-0.55-mRNA-1 31 KHNKGCNCKKTWCLKKYCECFQANVLCSENCKCVDCKNFE 70
589***********************************65 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MKDVHLKQQS IEIKESHVRK DEENVSPMVG KHNKGCNCKK TWCLKKYCEC FQANVLCSEN 60
CKCVDCKNFE GSEEYLAVLH GDHSNTNSCI QQANAGLSGA FDSLGKKFSP GLGKRKGHEL 120
LDSQEKNSQI QRLTLHHKPM NPLGGSDPLS ALSVYPVRQV IGSPVLHSPN FRYRSLLADV 180
IQPEDTKKLC SCLVLVSEFA QIGAGYEGSI TRLGTIYF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G29000.1 | 2e-50 | Tesmin/TSO1-like CXC domain-containing protein |
