|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold00575-augustus-gene-0.28-mRNA-1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
Family |
MYB |
Protein Properties |
Length: 266aa MW: 30929.7 Da PI: 8.0689 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold00575-augustus-gene-0.28-mRNA-1 | genome | THGP | View Nucleic Acid |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 44.5 | 3.6e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W+ eEd +l +++++G +W+ ++ g+ R++k+c++rw +yl
maker-scaffold00575-augustus-gene-0.28-mRNA-1 14 KGAWSVEEDNKLRAYIQRFGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61
79******************99************************97 PP
|
2 | Myb_DNA-binding | 49.9 | 7.1e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ T+eE+ ++++++++lG++ W+ Ia+ + gRt++++k++w+ +
maker-scaffold00575-augustus-gene-0.28-mRNA-1 67 RGNYTKEEERIIIKLHEELGNK-WSMIAASLT-GRTDNDIKNHWHAH 111
899*******************.********9.***********976 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MVRAPFYDKN GLKKGAWSVE EDNKLRAYIQ RFGHWNWREL PKFAGLSRCG KSCRLRWMNY 60 LRPGVKRGNY TKEEERIIIK LHEELGNKWS MIAASLTGRT DNDIKNHWHA HLKKCSKNNP 120 TISRIKTQSK EAYQHDADIA RKTETDNYVS SSPPYQVMES SQLPLEKSSS EFRSLSFDNA 180 PLFGINWIAE DNLTTLETPE QSFNDFWTEP FIMDNTYVQN NNLVSLAEGG FSTSQPWYNE 240 GIDSIYKAMQ EIKNYHGINV DPYLLN
|