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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
maker-scaffold00431-snap-gene-0.27-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
Trihelix |
Protein Properties |
Length: 313aa MW: 35917.1 Da PI: 6.3449 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold00431-snap-gene-0.27-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 50.3 | 6.2e-16 | 79 | 163 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikege 68
Wt++e+ +L++a ++ + +r++l+ W+ev++k++e ++er+ +qC+++++ l+k+ykk+k ++
maker-scaffold00431-snap-gene-0.27-mRNA-1 79 WTERETFVLLDAWGDRFLHRGRKSLRSEEWQEVAEKVSEIsKIERTDTQCRNRLDTLKKKYKKEKMRM 146
*************************************775278************************* PP
trihelix 69 kkrtsessstcpyfdqle 86
+ t ++ s+++yf++++
maker-scaffold00431-snap-gene-0.27-mRNA-1 147 AE-TGDAMSKWVYFKKMD 163
*9.688888********7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MDDTEDDARY PPNPYAVNYQ QGYGSSSRQK LSVRNAPYSR PSLVSSYEFA PRVPPPSAAA 60 PPPAAPKPSF GGRNSLTDWT ERETFVLLDA WGDRFLHRGR KSLRSEEWQE VAEKVSEISK 120 IERTDTQCRN RLDTLKKKYK KEKMRMAETG DAMSKWVYFK KMDVLLSSPP QQAGLSCGMD 180 SGEYVFMNPK VYLNRANGLD EMRDSPGNSE PTDREEDDSD GLPPKKRKFG RVNDEGSSFR 240 LLADSIHKFS EIYEKIETNK RQQLVELEKM RMDFHRELEK QKRQILERAQ TEIAKIRQGD 300 DEENDISAEN ASG
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