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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
maker-scaffold00249-snap-gene-0.32-mRNA-1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
|
| Family |
WRKY |
| Protein Properties |
Length: 538aa MW: 58995.7 Da PI: 8.242 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| maker-scaffold00249-snap-gene-0.32-mRNA-1 | genome | THGP | View Nucleic Acid |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 94.9 | 5.7e-30 | 191 | 250 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+
maker-scaffold00249-snap-gene-0.32-mRNA-1 191 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCFNDMSILITTYEGKHNHP 250
58**************************999****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 538 aa
Download sequence Send
to blast |
MEKNTVDLLS RRKNQEDQLK LAEAEMGEVK EENERLKMLL EKTVKEYQSL QMQFVDILQQ 60
EAKSKDTVPS HQAKEGPELV SLSLGITSSE PKKEDKKNNS FRNGQEEEKL NGALSLGLQD 120
YRFEPSSAEH VRNTSCSNNS FEEQKEEEPT EIWPPRKILK TMKIGDDEVS QQSQVKKTRV 180
SVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVS PSCPVRKQVQ RCFNDMSILI 240
TTYEGKHNHP LPVSATAMAS TTSAAVSMLQ SQSSISSQGG LNTSAIVPIS TSTNSHGFNF 300
TLSQNPSPQQ LYGLPNSSIS TLNSHPTITL DLTTNAPSGL SSSFSSAPRY PSTSLNFSSS 360
FSPSLEPNYI FQTHWNNGPT SYNNHGTVPA YNKNPIGSLN SIEKQPFQEQ LYQPYMKESI 420
VAATKAIASN PKFQSVLAAA LTSYVGASSG GVKENQGACE SSSSSMNFKW GESHTINPIY 480
SSSQNGIGCG SSYLNKSSSF NSPKQGVLAL FPPNSLQLSA SNNCASAAPP DNRDHFKL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
