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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
maker-scaffold00199-snap-gene-1.22-mRNA-1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family |
MYB |
Protein Properties |
Length: 268aa MW: 30647.4 Da PI: 9.9083 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
maker-scaffold00199-snap-gene-1.22-mRNA-1 | genome | THGP | View Nucleic Acid |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.3 | 7.2e-18 | 20 | 65 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ede+l ++v+q+G+ +W+ Ia ++ gR++k+c++rw++
maker-scaffold00199-snap-gene-1.22-mRNA-1 20 RGHWKPAEDEKLQQLVEQHGPQNWNFIADHLE-GRSGKSCRLRWYNQ 65
899*****************************.************96 PP
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2 | Myb_DNA-binding | 47.2 | 5.1e-15 | 72 | 114 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
++++TteE+++l+ a++ +G++ W+ Iar++ gRt++ +k+ ++
maker-scaffold00199-snap-gene-1.22-mRNA-1 72 KKPFTTEEEQRLLAAHRIYGNK-WAFIARYFK-GRTDNTVKNQYH 114
689*******************.********9.*********996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MKKSRSSTSS DSESGKRCHR GHWKPAEDEK LQQLVEQHGP QNWNFIADHL EGRSGKSCRL 60 RWYNQLDPNI NKKPFTTEEE QRLLAAHRIY GNKWAFIARY FKGRTDNTVK NQYHIMMARR 120 KRERFSVQGH RSHSKFQNLQ KLVTSSMSSL HSLSFSQSKM TTDSLSVDIF GGGRKKHLGP 180 SISSSSNETS HDFIVPGIPV VHEVVPQPFR FSNFDGVYES EEMLNLQRLD DNSTACWNLK 240 MASEQDQGDG SIVHKAVPFI DFFGVGIS
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