PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00914_0040
Common NameKFL_009140040
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HD-ZIP
Protein Properties Length: 425aa    MW: 45214.4 Da    PI: 8.3812
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00914_0040genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.38.2e-16113167357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
       Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     R ++++ q+e+Lee+F++++    e+r+ LA++ g+ ++q+ +WFqNrRa+e++
  kfl00914_0040 113 ARKKLSHRQVEVLEEVFQMDPAGVPEHRAALAREFGVAQQQIATWFQNRRARERN 167
                    7999*************************************************95 PP
2HD-ZIP_I/II75.31.1e-24114200389
    HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                    +++ls+ qv++LEe F+++    pe++++lare g+ ++q+a WFqnrRAR +++ql +d+eaL++++ + +++n rL+ eveeLr+
  kfl00914_0040 114 RKKLSHRQVEVLEEVFQMDPAGVPEHRAALAREFGVAQQQIATWFQNRRARERNRQLHRDFEALRECLMETSNDNLRLRMEVEELRA 200
                    799**********************************************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.4E-1684169IPR009057Homeodomain-like
SuperFamilySSF466891.23E-13105169IPR009057Homeodomain-like
PROSITE profilePS5007115.726108168IPR001356Homeobox domain
SMARTSM003893.7E-11110172IPR001356Homeobox domain
PfamPF000463.8E-13113166IPR001356Homeobox domain
CDDcd000864.00E-12114169No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MRNCDGPHTG VPQGKFGALT AGVPGRSPRD VIVAAEDERE LHFIPGADRH AGSGRTTVHL  60
EAEAAEGERP QSPGPKVPSS GSVPSPPKRE SQHDSAQKTS SGSGDNSTKG ESARKKLSHR  120
QVEVLEEVFQ MDPAGVPEHR AALAREFGVA QQQIATWFQN RRARERNRQL HRDFEALREC  180
LMETSNDNLR LRMEVEELRA THAQCKSGAG LAAKHEPATF PAPARHSQPG RTPGRDANEW  240
TGRVYCPPDV KHKSMRAVSL LDPSGSYGSA PPSFRSPLPV PSASTDSHVA AHFHPGSLPL  300
TFGLPPRNDP SPSPASPPAL FPSLLEPKGD VTLDEALSGV LRHGPGLGSA GGLVPSRGVG  360
VRALPAPGIA VPATSAGVPG QPLGGGLARW AGQAQEASPP WDGTEDLWQG MERVLPAWYF  420
RNQRG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HVT90.0A0A0U9HVT9_KLENI; Homeobox-leucine zipper protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.13e-17homeobox protein 2
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]