PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00861_0020
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 743aa    MW: 78736.6 Da    PI: 9.3533
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00861_0020genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.2e-14208248345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +WT+eE+  l  +++++G++ W++Ia++++ gR+   +k +w 
    kfl00861_0020 208 KWTPEEEHDLRALHQEHGNR-WAAIAEKLP-GRSQAAIKAHWK 248
                      8*******************.*********.***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500909.605147200IPR017877Myb-like domain
SMARTSM007171.5E-4151202IPR001005SANT/Myb domain
CDDcd001673.43E-4154198No hitNo description
Gene3DG3DSA:1.10.10.603.3E-12154208IPR009057Homeodomain-like
SuperFamilySSF466893.12E-20183251IPR009057Homeodomain-like
PROSITE profilePS5129418.571201255IPR017930Myb domain
SMARTSM007174.4E-11205253IPR001005SANT/Myb domain
PfamPF002491.8E-13208248IPR001005SANT/Myb domain
CDDcd001676.14E-10208250No hitNo description
Gene3DG3DSA:1.10.10.601.2E-16209252IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 743 aa     Download sequence    Send to blast
MSSHVEEFGN ALQPVMSQAV LETWDAWFSR LKAGGCQERG SELPGVGGGD SNNARPKALG  60
SQGGGAEVLS RGAGDFGNGG VKGIPEGYQG PFYTMGMGKK VACVGGIHTS GGAECEKAAS  120
QGESTATHGG VLEPDSASDS DVLVKLRTGK NRTKWAKEED AILAAFVGGS PETTDWEAAA  180
RALLGKRSAK KCRHRWRTAL DPQLASRKWT PEEEHDLRAL HQEHGNRWAA IAEKLPGRSQ  240
AAIKAHWKEI TAAKKAAMTT SPAVCSVKKA VSAESGPPPE RPQALPPVKP SPAEKVLPRL  300
ADGPMNPTAE LRFHSAWARS LAAEWRRNPP ATLGRSPTDP LDWSKGAGAA FPYGQGGVFQ  360
VEVTPQNLGV DAPSFASPGS EDRNADLRGL FAKSLRPLSP RNSTSQLLTS QLSDLEPLDF  420
DRVIPKPVTP RRSLSVPLAP HSAPTIVTIP VRMATSLDTS SAGWYRDSRR EPLLAPERPS  480
ADHAFQTAPF PEPIPHAIRT AFRGMQPPSA AASAEAAAIT SGFGLRMTSA AVAVNPREQA  540
GVRKRKRASG GSPGRCATET RNGTERNKSS GMLLASGGPA QRAMYPPGTN DAILCALLSD  600
HLRSLVEEQG ADLELGCKKP GGSTPPDVFR LREQHSQMRS IVQFLQTLIG GSAAGGLLAK  660
QETQLEAPRN EKLSLPPESG SETRNVYPDG VNTRKTLVEL SRAHDESEIT SCLLTLERLS  720
GNGTGAGVAY VPVERGSGIR SEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A7e-1615525410107B-MYB
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1ILQ00.0A0A1Y1ILQ0_KLENI; Myb domain protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.18e-19myb domain protein 109