PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00762_0030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | Dof | ||||||||
Protein Properties | Length: 689aa MW: 71055.1 Da PI: 5.5897 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.1 | 9.3e-39 | 219 | 279 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k +cprCds +tkfCyynny+++qPr+fCk+C+ryWt+GG+lrnvPvG+grrknk++s kfl00762_0030 219 PDKLEPCPRCDSYDTKFCYYNNYNIKQPRHFCKNCQRYWTAGGTLRNVPVGAGRRKNKHKS 279 688899****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-27 | 216 | 276 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.3E-32 | 221 | 277 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.472 | 223 | 277 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 225 | 261 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 689 aa Download sequence Send to blast |
MTSGLGRNPR ENGSPGKEQE QGSEHVSHAA AVATISMDPT AAEATDDGTG EDQRHQTGAV 60 DGPSSSSDNN RIVAEPQQSG QKGSIHAADR VRGGDAGVST LKDQEGDNSR NASGELGSSS 120 GSNSLDDGNC SNTAEGGKEQ QDGSSKQAEK QPPLQGQKLQ QAPGPSPKSL GCGSENRQKG 180 GKGGGNTKGG EEEEKEVQGK EEQGAGDQEE GGRPVLKKPD KLEPCPRCDS YDTKFCYYNN 240 YNIKQPRHFC KNCQRYWTAG GTLRNVPVGA GRRKNKHKSI QRLGPGSGSD SELVIPSSSG 300 GEDYLVRSGS LRSSNPSLNA TTFKPPASQG FQGRFVTSSN PPLYDSGTND KSGVTHKRDG 360 TSADEMQSGD QFRGPHYGGA AEAGPEADPR RAKRVKRNPP PETGVPVGRF GRGFRENSEC 420 MSSQADNRDG GAFVADAMMS PESAKNAQWP ARAGEAFGGP VTGWNQGAAV PATPTGGAWA 480 PGNTAPWGGM WNQPWPYQMP MGQRGTEAGG DDEPGGAQVM ATPGANYGAS PQGANWGMVD 540 NSSFGGGANW GASPVNAANA AAAWANANVW AGLAAAGNAW GPPWAAWSVF GAGPAAAAAG 600 MAPSPQPAPG GGMGKHRQEG GGEGETRADG VWVPKIVRTE PVRGSAPLQW QQQLGGGGDA 660 GYLGLMKNGE MADSPGGQED GVPTPLNLL |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00046 | PBM | Transfer from AT5G39660 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IRN6 | 0.0 | A0A1Y1IRN6_KLENI; Dof zinc finger protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.2 | 2e-33 | cycling DOF factor 2 |