PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00652_0070 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | Trihelix | ||||||||
Protein Properties | Length: 549aa MW: 59433.7 Da PI: 8.2771 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 37.4 | 6.6e-12 | 158 | 239 | 2 | 76 |
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 W + + l+L +++ +++ +++++ + ++W+ v +++ + g++rs+ Ck+kwenl ++ kk+++ ++k s++ kfl00652_0070 158 WGEGHCLVLADGKLSTDVAIEEDGgvrakhtTANTRWDLVEDYCFANGVHRSASSCKDKWENLLGEVKKVRDYQRKIPSGKD 239 6777777777777766666665422333333899***************************************999865555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.0E-7 | 186 | 246 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence Send to blast |
MRQHGIGYGV GDFSQAVADE DAEFADEQAP PSVAARHTFL GTRAFRPLTT SPQVFPESEI 60 AFGQFSSPEV QVPETQPDCE VTGFAGSEGH VTGVASDQQH GGVAARQEHE PPSTQEGRGG 120 SHRKGKGASK APAVSVKPPG VTKATGKSGR LYVQRAVWGE GHCLVLADGK LSTDVAIEED 180 GGVRAKHTTA NTRWDLVEDY CFANGVHRSA SSCKDKWENL LGEVKKVRDY QRKIPSGKDG 240 YWAMDSAAKR EAALPPNVSQ KVYDRIVEAL GGTASMDPPS VLQSGSASAP DSEEEAYLAG 300 EGPDPAKRTT GYRKRAWGSA KKELIGTLKE NGANLGDQLK ASEEGKEKRF KESMEFEDRK 360 LRQQVELEER RLKHDEMLGG AMQMMAQAFA QMVQQNARRE MFGSTAGSAN FPQCSTMPKA 420 MLSKCISHSK SIAVASPSKR TSWSTPPLKV STAVEASAAQ KEKEMRAEMK AAVEAQKEKE 480 MKANVKAAVE DSVAKGKRKM RAEMKAAVAQ RGKEMRADCG DISGPNEKEM RAHMKAAVET 540 RETEISPNF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IMZ5 | 0.0 | A0A1Y1IMZ5_KLENI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1881 | 16 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 4e-16 | Trihelix family protein |