PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00550_0010
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 526aa    MW: 57599.9 Da    PI: 4.9857
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00550_0010genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.8e-11471518246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 
                      ++W + E+e l+++v+++G g Wk+I  +     ++Rt+ ++k++w++
    kfl00550_0010 471 NPWRPAEEEALLKGVREFGEGKWKRILTEYAhvfERRTGVDLKDKWRT 518
                      69********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-13463521IPR009057Homeodomain-like
PROSITE profilePS5129416.557465524IPR017930Myb domain
SuperFamilySSF466891.95E-13467519IPR009057Homeodomain-like
SMARTSM007179.0E-8469522IPR001005SANT/Myb domain
PfamPF002491.3E-8471518IPR001005SANT/Myb domain
CDDcd116601.87E-16472518No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MVEPSGPSLR DRWMWEFLLQ DQATPYAALT ILGGARFRAL AQDPALNRLQ LLRHLQEQLD  60
RGRFDHDTLA ALAGLQALAA RLEGTPAWRP VVPSPELYGR VKIEVVLQHL RKETADWAAF  120
EESLKELFPE SVPDTEEEQW GGLQKAQEEL WAVAAKLAPP LQEKIAKRYP RAPLVAALRA  180
FLEAAWGAVG PPYLQLVADD ISGGRYKLGG EEEAEAPQGL VVTMKELLAS FPAKDARRAM  240
EVGTIGSSGL QRSKRRRFSG GEPSRAPAAA EVPTPVEVPV ATEVRGEVDE AMPDLPSPER  300
EDEPPSSLPA PDAAAVIDDL RESSQALRQM GHDPLPAVLA QAGGARSTRK ATRAATAAAA  360
KSDGEPEGEK EAAIPEEEEG AGEEPSPETL AQRAAERGKA KMSLMDRQEG ARTLEWTEEE  420
DPIESTPEAG ARPPRLPSPG AREPPPDKIR KSGEGAPKST LKSGKPRRPT NPWRPAEEEA  480
LLKGVREFGE GKWKRILTEY AHVFERRTGV DLKDKWRTRS KDQDFQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1INI90.0A0A1Y1INI9_KLENI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP15031424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.21e-09MYB_related family protein