PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00466_0010
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HD-ZIP
Protein Properties Length: 817aa    MW: 84312.6 Da    PI: 10.8206
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00466_0010genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.11.5e-1868119656
                    S--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   6 tftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    ++t++q+++Le++F + + ++s+ ++ e+Ak +gL+ rqV +WFqNrRak++
  kfl00466_0010  68 RLTTDQIHALEKAFDEaDGKLSHPQKVEIAKGIGLEARQVAIWFQNRRAKWR 119
                    689************99**********************************9 PP
2HD-ZIP_I/II95.45.7e-3165155291
    HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                    k rrl+++q+++LE+ F+e + kL++ +Kve+a+ +gl++rqva+WFqnrRA+++t q+E++y++Lk++  +l+++n+rL+ke ee r++l
  kfl00466_0010  65 KIRRLTTDQIHALEKAFDEADgKLSHPQKVEIAKGIGLEARQVAIWFQNRRAKWRTEQVESQYDVLKAQNARLQADNDRLKKELEEARHAL 155
                    669**************99999**************************************************************9988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.11E-1554122IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.8E-1759126IPR009057Homeodomain-like
PROSITE profilePS5007115.9260121IPR001356Homeobox domain
SMARTSM003898.2E-1562125IPR001356Homeobox domain
CDDcd000865.54E-1467122No hitNo description
PfamPF000466.7E-1668119IPR001356Homeobox domain
PROSITE patternPS00027096119IPR017970Homeobox, conserved site
CDDcd146860.00365114149No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001558Biological Processregulation of cell growth
GO:0009637Biological Processresponse to blue light
GO:0009651Biological Processresponse to salt stress
GO:0009965Biological Processleaf morphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 817 aa     Download sequence    Send to blast
MARPASASTP GASKRKREFG DAGKGKKSHK GKGKRSAEEA RGGPSAAEMR KMDSPAVQRA  60
KREIKIRRLT TDQIHALEKA FDEADGKLSH PQKVEIAKGI GLEARQVAIW FQNRRAKWRT  120
EQVESQYDVL KAQNARLQAD NDRLKKELEE ARHALVVARS GIAHPTPSRM EPVAGAGGAA  180
FFGSKDGESP GSVYEKLQNL LKSMKGKRSA FLAAAAAGES SDSGSGSSDE SSEEERQPIK  240
RAKRSALQKP RPALAAKPGP TPSRSSVAAG SGAKRDGTRR SPVGAPSKGS GADKGAGPSK  300
AVPKGRLTRE SSMGRPSTLQ RRGSKLEALQ LPVKMSPAVP LFADKDRAKA AVEAPTPRMG  360
RGKPSAATPG STPSMWLGPR QDPSPTTGPL APGEPQPAHP LGISGDGTVA LLDKVPPSAV  420
GRGFSHLLAG APESSPTDST VSPSAYLLSD GKEPSPTTGA LAGADAVPAK QSTPPKPSPL  480
REESGKEARL QLAPSASDWG EALRKAEQQR SAAAAAAAPA PARLDSPDLP TDMARDFVRA  540
LGAGEAARSP SPSVLPSVRE FPNSAAQDFL AKYRAMYGEI HRSSERTSEG ASKAADILAR  600
VARGGRRGGD TAGLAARLAA LDGGLSKGLD ALAVLHLGAA PGAGDNKGAA ERNGLLELSL  660
EPGSGLAPSR TAQLLAEAAA RVSAGSSLPS RLARGTAFLG SASAFEAFRG GGNLLDPYQD  720
PPFSSGLREE RALSPSLRDA ISQHRSGHTT QALLPGEGRE EAGAPGSSTG PLTPRLGPAA  780
PIPPWLTAVA SGLWGEGGSP GGRSSSPGWW TQIQSGH
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00323DAPTransfer from AT3G01470Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IHB10.0A0A1Y1IHB1_KLENI; Homeobox protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12916189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-22homeobox 1