PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00311_0120
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HSF
Protein Properties Length: 603aa    MW: 65272.3 Da    PI: 4.5002
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00311_0120genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.71.2e-351051952101
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Fl+k+ye+++d++++ ++sws+++nsfvv+d+ +fa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g++ ll++i
  kfl00311_0120 105 FLTKTYEMVDDPSTDAVVSWSRSNNSFVVWDPPQFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEDFLRGQRYLLKNI 191
                    9********************999*****************************************999.........******************* PP

                    XXXX CS
   HSF_DNA-bind  98 krkk 101
                    +r+k
  kfl00311_0120 192 HRRK 195
                    **98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467852.45E-36100194IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.8E-64101194IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.101.3E-39102194IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000562.4E-20105128IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004471.6E-31105194IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.4E-20143155IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340144168IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.4E-20156168IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 603 aa     Download sequence    Send to blast
MEGMQDQYIE DSLGMNQQLP RNAQDPMDFW QMQNADSQSQ SFGTLAINVP DVNAATPLPQ  60
EVVNALPQTI PVQPAPVPSQ PQSSRPPVYP PQPADGLQGS APPPFLTKTY EMVDDPSTDA  120
VVSWSRSNNS FVVWDPPQFA RDLLPKYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEDF  180
LRGQRYLLKN IHRRKPPGNA QAGATQNAAN NNMVLEVGSY GIMDEVERLK RDKNVLMVEL  240
VKMRQKQSSM DRVVSELQSD LQLTNQRQQQ MMSFLAKAVQ NPSILQSLAQ QAQGRRQEQA  300
VQAARLAASR KKRRLPADME LPNGVPLDVA QAQLVKFSPA QEAARKVFEQ MYGPVQGGAG  360
SGALQTPLPD QASSHSGPGD MDGLLLDGEG AESGMRVRGG SNEGEISMKS AAEQLAAIVR  420
RKSESEATGT SHPGASPDGL GQQHPGGPAQ MEGLDTARGF GPGFGMPGEA SSGPSPFAHP  480
RAAFAARSTP PGQFGELGGL DDFEGMPEEM QDPMADPTQE PPGDVTNESS FWEQFLAGAV  540
GSADDDSGGP AFTPDLDSLN AGESLGSPMA SAENPNEHWW DANNQVDHIT EQLGQLDPHS  600
AQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B4e-2910019424129Heat shock factor protein 1
5d5v_B4e-2910019424129Heat shock factor protein 1
5d5v_D4e-2910019424129Heat shock factor protein 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00514DAPTransfer from AT5G16820Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1365722e-33EF136572.1 Chlamydomonas reinhardtii heat shock factor 1 (HSF1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I7630.0A0A1Y1I763_KLENI; Heat shock transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9617233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.15e-80heat shock factor 1