PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00265_0090
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 672aa    MW: 72153.8 Da    PI: 7.4129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00265_0090genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.82.8e-09230273146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r+r+Tt E  l  +    +G++ W++Ia+++  gRt++++k+ w++
    kfl00265_0090 230 RQRFTTAELHLVMQPQSFYGNK-WALIANHFK-GRTDNEVKNAWHT 273
                      89********************.********9.*********9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.98E-19183271IPR009057Homeodomain-like
SMARTSM007170.45184226IPR001005SANT/Myb domain
PROSITE profilePS500905.819185224IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.7E-10186230IPR009057Homeodomain-like
CDDcd001675.69E-6187224No hitNo description
PROSITE profilePS5129415.902225279IPR017930Myb domain
SMARTSM007178.7E-4229277IPR001005SANT/Myb domain
PfamPF002492.5E-7230273IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.3E-15231276IPR009057Homeodomain-like
CDDcd001678.74E-4232273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    Send to blast
MIPALVLVIL EGHQDDEIVR LCRMGVLAYC TSVLAPGLPT FRLAIAQNSL SKELFVSYDW  60
GNNAARIAGA NTPGTKKGLQ HMILDLQPRH HSVEVLDVIK DELQRLALYY KHCQGSFTGN  120
PPGETAQDLL KAQYPGERCS VCQVLPGSVN LVARGLSGRT NDLVGEMKEA NPPPLEEGAP  180
EPMWKGAWTD VEDQVLRKHV ATNGEKDWKS VKGKSCRLRY MNHLRPNLKR QRFTTAELHL  240
VMQPQSFYGN KWALIANHFK GRTDNEVKNA WHTRRRQMER QRRKALEWEA AEQSGAGTAS  300
CGSDIVDGPA CATSSLCAMR AVHSHGSQEV FCAEHLPGAP IDVPAADYRA RGAMDVPVTC  360
TGPVLPDESY VGPGNPPFSQ WPDYPASDSC SPHLPANLLH LPSVPKTQSS SSLPIVHLCT  420
PVPYYCHVAT LERAASTGTE ASGGLVIDGP TVSSWAARSF AGDPAANGAW RAESACSAAA  480
EEKTWPPGGG RLENKRTTQS EPAPGASSPV PKPCALAPPR LVIPELDQHD ASWPDSIYLS  540
PIGALPALSP VVPSPPHSVD GFRPPNVLVG PQPQRGAESP GGLAPWTSAH FASSETGWRP  600
PAGDGLGGLL TSHGMVPLAP LQESAVLGGA LGTYPEWLVA APTGSLSYWT VQPMKPDTRT  660
KMVANLRRSR SV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C2e-1718527727126MYB TRANSFORMING PROTEIN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I7T80.0A0A1Y1I7T8_KLENI; Myb domain protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35515.14e-27high response to osmotic stress 10