PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00264_0050

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

CPP

Protein Properties

Length: 974aa MW: 100261 Da PI: 8.756

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00264_0050	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46.1	1e-14	415	455	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCfa+g++C+ eC+C++C+N+ e+ kfl00264_0050 415 KKKQCNCKNSRCLKLYCECFASGHYCGPECNCQGCCNNAEN 455 689**********************************9875 PP
2	TCR	53.4	5e-17	511	548	2	39
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kgC+Ckks ClkkYCeCf+ag+ C++ CkC dCkN kfl00264_0050 511 HHKGCHCKKSGCLKKYCECFQAGVLCTDACKCIDCKNF 548 78***********************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	2.6E-12	414	455	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	35.141	415	550	IPR005172	CRC domain
Pfam	PF03638	2.0E-10	416	452	IPR005172	CRC domain
SMART	SM01114	3.3E-19	510	551	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	1.1E-13	513	548	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 974 aa Download sequence Send to blast
MEGGAVREQG GLVRPAAGAQ QQAGRLAQAG AAPASLPPRA GEGEWGMANN QAPRDDRTAH 60 TVPGSVRLAV QDGHGVGQIQ RPPHTVVLAA EEQPSRRQGQ AGQKHASTTA RPVGSPLPGA 120 LLPASAPPAG HSEAAGLGAS NGGMQAARNS FQGGARQQPD NATWEAPGGV GAAKPGAPQL 180 SSPGRRGDAP SAASHLAQPV RHPAPRFLGG SSQQGSAALR QPLPFGVHLM AGEAGGGRQH 240 QPAGSRQGLP SQGGLPSRGS AAPGSSPVTA WPSGPACPPS QLPSPRLIVR SMDPSHARAL 300 SPPGRPAPDG ALRKPVRHLD FGAQPYGLPA PPHQTAAHSW GPALPAASFL QGPSPHTAPL 360 PATSSSSPTW LLVRLELSLR ASPCVRCLLA ARPVPGASPY RGLRAAPDKP EPPPKKKQCN 420 CKNSRCLKLY CECFASGHYC GPECNCQGCC NNAENEVTRQ EAVEATLERN PNAFRPKIAP 480 SPDVKNEQEA AAPAAFLADP AATEAPVAGH HHKGCHCKKS GCLKKYCECF QAGVLCTDAC 540 KCIDCKNFDG SDERRLLLAG SIDPAPQGPP GYAAPSPPPF KKARLQDRAL QSPPQAKPAQ 600 GGSGAKSIPG SSYPAGRAPQ KPPTRSLLSG VVKADAVQEL CKLLAIVTQE VANNFEGPPT 660 PAPHGPLPTP VSSGLPVLQC DTDAESVFCL GSARCAAFCS CSPCAAAAFS RRGLTVAPCL 720 AGAAQHPGLL AAQQHRQEAA FAAAAARSDD GGRPGTSDDG AHTAVEERRA GGGSPAGQGP 780 GPGEAEEQSP EALLLSCDEE LPAEKEVQVA LPGGLYGGAD EGGGEGAAAR LYAAQEQTVL 840 EEFASCLKKI ISVGQKRLRQ YEETLSPMRP AYSGPPPLHY RPPPAPAGSA FPQRFPAGQA 900 PPASRQPGGA GRYVPQYHQQ APQQQQRGPA VGPAPYRPAY QQQQQQWQPA QAGRQARALP 960 RALRATGVVD RGIE

Sequence ? help Back to Top

Protein Sequence Length: 974 aa Download sequence Send to blast

MEGGAVREQG GLVRPAAGAQ QQAGRLAQAG AAPASLPPRA GEGEWGMANN QAPRDDRTAH  60
TVPGSVRLAV QDGHGVGQIQ RPPHTVVLAA EEQPSRRQGQ AGQKHASTTA RPVGSPLPGA  120
LLPASAPPAG HSEAAGLGAS NGGMQAARNS FQGGARQQPD NATWEAPGGV GAAKPGAPQL  180
SSPGRRGDAP SAASHLAQPV RHPAPRFLGG SSQQGSAALR QPLPFGVHLM AGEAGGGRQH  240
QPAGSRQGLP SQGGLPSRGS AAPGSSPVTA WPSGPACPPS QLPSPRLIVR SMDPSHARAL  300
SPPGRPAPDG ALRKPVRHLD FGAQPYGLPA PPHQTAAHSW GPALPAASFL QGPSPHTAPL  360
PATSSSSPTW LLVRLELSLR ASPCVRCLLA ARPVPGASPY RGLRAAPDKP EPPPKKKQCN  420
CKNSRCLKLY CECFASGHYC GPECNCQGCC NNAENEVTRQ EAVEATLERN PNAFRPKIAP  480
SPDVKNEQEA AAPAAFLADP AATEAPVAGH HHKGCHCKKS GCLKKYCECF QAGVLCTDAC  540
KCIDCKNFDG SDERRLLLAG SIDPAPQGPP GYAAPSPPPF KKARLQDRAL QSPPQAKPAQ  600
GGSGAKSIPG SSYPAGRAPQ KPPTRSLLSG VVKADAVQEL CKLLAIVTQE VANNFEGPPT  660
PAPHGPLPTP VSSGLPVLQC DTDAESVFCL GSARCAAFCS CSPCAAAAFS RRGLTVAPCL  720
AGAAQHPGLL AAQQHRQEAA FAAAAARSDD GGRPGTSDDG AHTAVEERRA GGGSPAGQGP  780
GPGEAEEQSP EALLLSCDEE LPAEKEVQVA LPGGLYGGAD EGGGEGAAAR LYAAQEQTVL  840
EEFASCLKKI ISVGQKRLRQ YEETLSPMRP AYSGPPPLHY RPPPAPAGSA FPQRFPAGQA  900
PPASRQPGGA GRYVPQYHQQ APQQQQRGPA VGPAPYRPAY QQQQQQWQPA QAGRQARALP  960
RALRATGVVD RGIE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	3e-30	416	558	11	131	Protein lin-54 homolog
5fd3_B	3e-30	416	558	11	131	Protein lin-54 homolog
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00045	PBM	Transfer from AT4G29000	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0U9HSQ2	0.0	A0A0U9HSQ2_KLENI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1469	17	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	8e-38	Tesmin/TSO1-like CXC domain-containing protein