PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00255_0190
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 1111aa    MW: 115825 Da    PI: 9.5259
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00255_0190genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.4e-15121165147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r rWT+ E++++++a k++G   W++I +++g  +t+ q++s+ qk+
    kfl00255_0190 121 RERWTEAEHDRFLEALKLHGRA-WRKIEEHIG-SKTAVQIRSHAQKF 165
                      78******************88.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.12E-15115171IPR009057Homeodomain-like
PROSITE profilePS5129420.621116170IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.5E-8118167IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-15119168IPR006447Myb domain, plants
SMARTSM007175.4E-12120168IPR001005SANT/Myb domain
PfamPF002493.6E-12121164IPR001005SANT/Myb domain
CDDcd001672.25E-8123166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009734Biological Processauxin-activated signaling pathway
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010600Biological Processregulation of auxin biosynthetic process
GO:0042754Biological Processnegative regulation of circadian rhythm
GO:0043433Biological Processnegative regulation of sequence-specific DNA binding transcription factor activity
GO:0046686Biological Processresponse to cadmium ion
GO:0048574Biological Processlong-day photoperiodism, flowering
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1111 aa     Download sequence    Send to blast
MDMMQTGYQN QSQDGTSPRP SFWPQFMMGQ GGMVPPGQVP PLAGGPAVYP SGPTPALARY  60
PSGSVRPSLP APLLMPVPPQ PLHHAQSGGP LIQQMQPGAK PSTSESLSTK VRKPYTITKQ  120
RERWTEAEHD RFLEALKLHG RAWRKIEEHI GSKTAVQIRS HAQKFFSKLE REGSTANPAS  180
SAPEIDIPPP RPKRKPSHPY PRKAGGNMSE SESEYGPSPR TGSRTEPLDE ALSPNTDSLQ  240
RGQSRSFSLW RNGSAPELPL GPSPAVSRDP AALPLSLGRS VSVGPALPDT QQQYNSLKLF  300
GQLLGPKRGE KDEGDQQRGA TKLLLEDGCE RHATSERSFL ESGVSSAVIE GDATDSYAPS  360
TSGRVFPSQS HSKDLHRQQS SSQRGDSKDF AFAAPPPKGS APAGRPSQMP ATQQTPPFSK  420
PEMAFSQAPA PALFAPAMSG AMPAQLAQMM ATQYAAGGQF GGSAQQWMPF GAGGPWGNAA  480
FEQLAMLAQM NAYNTANSNP FGPWGANPAA MWGGFGLGQN AQGAGGTGAE GQSAEEAAAE  540
SRAAAAAVAA ATMAAASAWW TLQNNAAAAA QMGRPSALPF PTPPYPQQQQ QQQPASAPQG  600
PSPADYGAPP LLRMPTAHSV QRGARSEETP IRPNSPPASA KESELEQKGA AGGTPRMAVP  660
SASAPQPEME AASSDPRSMG APGGVPREAA IRRAERANKL RELKGRSGKA GDLLADSSVT  720
PGVFTDSCPW ASSQTRRSLE SSADKESAAV QKGGERGDHK GAAEEGRVQL KGGEQKEEQH  780
ALEAAILKKL KKDERRRDKL RTQSASGSNE PAGRAESAAG HSNDRTAEPA PQRGGSPPEV  840
SNSDGGASGS GKEGSGGGPS SNSSAVGDIP NEDQQGARGR AGSEGASTEG EREQAGERGG  900
QQKGTSPAED ERPGEGAPEP PQGDDRQAGS KPGRPFDELF RHQPQLQIAP ALMEQGSDDR  960
TPTARSGQAG GKDGAVGEGL VRSASGKHHH HRHHHHAGNK NASAATLGSS TAGGSSGFVP  1020
YKGYQGTFVS QGSLDSQGRG REIKHDRPDP GADLPSPAKR QRVQVVAGEG VTRDGGEERR  1080
SRSPPTEKRS SPAGGGGGGG GVTGLSMLMQ F
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00119DAPTransfer from AT1G01060Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I7A50.0A0A1Y1I7A5_KLENI; LATE ELONGATED HYPOCOTYL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12551549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37260.17e-33MYB_related family protein