PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00223_0090
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HD-ZIP
Protein Properties Length: 449aa    MW: 48703.6 Da    PI: 7.5997
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00223_0090genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.81.4e-16300352456
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
       Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                    + +++keq ++Le++F+++++ s +++  LA +lgL  rqV vWFqNrRa+ k
  kfl00223_0090 300 KMRLSKEQSQQLEAAFNEQSTHSPKQKNALALRLGLRPRQVEVWFQNRRARTK 352
                    56799**********************************************98 PP
2HD-ZIP_I/II112.33.1e-36299386289
    HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 
                    +k rlskeq+++LE  F+e+++ +p++K++la +Lgl+prqv+vWFqnrRARtk+kq+E d+e+Lkr++++l+een+rL+kev +L++
  kfl00223_0090 299 RKMRLSKEQSQQLEAAFNEQSTHSPKQKNALALRLGLRPRQVEVWFQNRRARTKLKQTEIDCEVLKRCCETLTEENRRLQKEVIALKS 386
                    89*********************************************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-16271355IPR009057Homeodomain-like
PROSITE profilePS5007116.568294354IPR001356Homeobox domain
SMARTSM003892.0E-11296358IPR001356Homeobox domain
CDDcd000861.58E-13299355No hitNo description
SuperFamilySSF466891.59E-15299362IPR009057Homeodomain-like
PfamPF000464.4E-14300352IPR001356Homeobox domain
PROSITE patternPS000270329352IPR017970Homeobox, conserved site
PfamPF021832.6E-10354386IPR003106Leucine zipper, homeobox-associated
SMARTSM003403.4E-15354397IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MLLSEENERL RAELDRMKSL AASLLGVPAV REPQAEPVGL GRQPSGNQLM PSAQEPSNSF  60
QLSLSQPTVS DFVGLRSSTS SFNSSSPATV SLGAFPTLSR AGSGLHGGDF FPQGMQATTS  120
QMNGVIDFPV FLTGGGRPQR QQPVLGSSAY SLENLQAFAG DIRSSPVQKT QAMLPLLPVG  180
SSGGGLPQPA IAPPAKKDET FIYPGISHIE KKLSDHLKPF SSHLGVHFPP APIPTAQLAA  240
KEDPPHEGGA QGYASQPRDR EAGKQGYAAQ PAAEEKDDNE EPKQRSGRKR DRDSSEENRK  300
MRLSKEQSQQ LEAAFNEQST HSPKQKNALA LRLGLRPRQV EVWFQNRRAR TKLKQTEIDC  360
EVLKRCCETL TEENRRLQKE VIALKSRPPA SSGDDRREFG AEAPVCVKCK ETLSNAEASA  420
LHIQLTEGGL VFDKQESGLD SEQHTVSVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1346354RRARTKLKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IAQ80.0A0A1Y1IAQ8_KLENI; Homeodomain leucin zipper protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.15e-42homeobox from Arabidopsis thaliana