PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	2230	2272	4	46
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqk 46 WT+eE +++ + ++ G++ +W+ + ++ ++tl q++ ++q+ kfl00212_0050 2230 WTQEEKDRFGEMMTRQGKKkDWEQLQEAFP-NKTLQQLRTHFQN 2272 ****************************.**********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.64E-12	1537	1592	IPR009057	Homeodomain-like
PROSITE profile	PS51293	17.489	1541	1592	IPR017884	SANT domain
SMART	SM00717	4.3E-6	1542	1590	IPR001005	SANT/Myb domain
PROSITE profile	PS51293	5.331	1785	1826	IPR017884	SANT domain
SMART	SM00717	2.2	1786	2276	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	2.47E-6	2225	2274	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.0E-4	2230	2279	IPR009057	Homeodomain-like
CDD	cd00167	0.00257	2230	2274	No hit	No description
PROSITE profile	PS50090	6.411	2230	2274	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 3102 aa Download sequence Send to blast
MPGNEELPVW GGGGRGHGPP YGRDRGERID RVDRGRRDFP ERPPGFARNV APIAPPQGPV 60 PLKRRGPGRP YVYGEARYGP PGMRGAEVGP APFLEGGPPP PAARRPERDA FYAAGSPPYG 120 PAGDFARREA GRDVGYGPEV PGEGPVARGA FYRERGDAVA RDLDGGPGWQ GREPPPPMAL 180 REFRERERVR SLDRGYRRPG FAAAPYGPPP PRDNRVDRFG REWLPDTTRR PPAASDDLPP 240 VDWKSLAELP SPREGSGGRD LPPREVGGPG LVAREVGPGF REGLGPRDGG FTTQEGPLTA 300 RDGFGTRDAS VAPPVPEPLY ARREAAVGSR DGFGGRDLGP LSTREPPFGL RDGGAALKEG 360 PYFPRERPGP SPWRTSMASP PGSVPGKGGL RDREDFPPRR EGPGERIDFN DQPGPAERRG 420 DERPALFERL AERPGRAPDR TDRSPGVFIS PPPHPEYPPD KPALDKVSPR GLSSAKGSPR 480 SENRPSPRSS EAAASPRRPT EKAPPKDSSL ADRAAGAAPP VAAPVLSVAP LVASIAPFSS 540 PSPLEPSMSG QSSEARAGER PRPRLGWGQG LVAFERVKPK DEEEQVSSAR RSSGADAGPE 600 SVGVSPAVSE SKSVAHTAEP EGGVVNSLQM HKDEGKEAPP AEAAEAESER ARVEASPATP 660 DSGKLVDLLL KTAVSEALAL DSEAGAPKAQ PSQAPVPDPQ APTIKAEAVT PKVGKSSPWP 720 QSLSALSEKE VPPKTEPPMT WPQSLSALTE KEGPVKPREA APKEGPVVSV DMGPATVEAS 780 PAVKASPWPQ SLSAAMGLVS APEGLAPIRT PRLEEQSPAG QVHSDGNSIF DSLLHRAQAS 840 DAGAAKPVNP SDSIPTSPLS PTFPQPSKEE PPAFPLSAST QPMTFSSLVG SSLPEPSHRS 900 PFGDAARLTS PYQDGPRRSY LETRPYGASP GLFSTGFHRS DSGSLGLGGA AWKPEDYLRS 960 DAGFRKDGAV EAGEGSLGRT PSEAVNLKEA VLASVGERGG LESGQKTPPP QARVEAAEKT 1020 EDQSSPMQVD GPVVAEGVAE GERKVEETEE DGPAATEKPG EGAAAEEVGT GEPSKDVILS 1080 EMEQVDSEIE RLERQLSRMA SLEKSGALAS TPTAQALAEA TGIVGVQAEA MKGSQEAEGA 1140 TTAEGLSQET GIEGVAGSKQ LGGTGTEKEE APTEEEGAEK GGEAAAEEGP GKGRTPKASE 1200 GPPSKAGSLK WKWAVAGNGD LSPDTGAGKQ ETGAAAQEVP EAGEEAAAKP EGDERGTEGA 1260 AAEVKEPAAA LQAKRDFDPL AMGGPDPFLK FEQIIASQDG LARYLTEQHP PPPKAVPKLE 1320 PKADELILSA GCQDRAVFVQ ARIWANREAA RRSEAGLQHL LPAGCQLGDG PLYTCPEEAP 1380 YWQVNEEAHA RIEEVLRARL QEKKRDLAFT ERVLALRYRF LRALWRQELE GVPARPALGK 1440 ARETPRLSKD KAIRRMESGS DRKAADAKAP PKSSQRFRPG GKLDAEELQI VSRLLAEPGG 1500 EVRGHLKMTP MILTDEERAA HKFVTRNALV RDPVQEAALH KLVNPWTDAE RKLFLEKYTV 1560 YNKNFKKIAS FLEHKSTADC IRFYYLHQKS EDFDKVRRRQ QLKKRRDYRG NNSFMGVNAL 1620 AGTTGRRDRE ANAARVEALP ALTAVMKESS KAARRAMDRG KPPSMPADVE RGSQSKVAAA 1680 AVSAVVRADR GGLLDPISGD APPRKKKRDK LKFRGGPPRP EQSEGPVGGE ANAEPGPASE 1740 GVIKRVSSKG ARSNLGRKER PWLDTGTPTG AGSEERVLGL ASPEDPALQW TDLERQTFVA 1800 AIREYGKDKS SAQCKAFFSK SRKRLGLDRL LEERSLKGTP GAGPEDGGAA NNGAAPEVGT 1860 GEKVGVASES DEDRTIAEVA SIKGQGSADK GALEVAGGAA GGAKEAAPFG KKVSNEELKR 1920 ELQLGLAKVQ EKAAILGRKE QEVKASAAPP TKPTLVVKPP AGVAPGVQKS PTSLPGGADD 1980 ELRAAMTLLE AKEGLSDSAD EMEMRPLGEV LKRKGSLVGA GGDAQRPKKK KKVEKTVGAA 2040 EAGGPPKKKA GKPKGEEAGP GSQGVEPKPM KPKPKKSGEG KASSVKGERS GKAASEDLEG 2100 SVHGAPSLWR AVLPKEEGGA ADGHEMSLMA TEGSLSCSDK EGDEAGEVSA QARPAKGPEK 2160 KAKPRTKKAA PEQDVPEAET FTALLAGGDS DESSGEPILG PGKQAPAAAA AGKKRDGGDK 2220 TPGERKIAVW TQEEKDRFGE MMTRQGKKKD WEQLQEAFPN KTLQQLRTHF QNSKAKRLKE 2280 LEREAAQAEK DKERHKDKDK ERDKEKEKEK EKERERERER ERESTPTPAP PARALAATPP 2340 LPEGLREVFS PDQVQQLQKL QAHLESERAA KLLAATFDTS KHSEPPSSRE VAQPGLAGSA 2400 SLTIPLPGRV RPMTPPPAPS QAHPAPGSRL PPQKKRKLED EQPEMGGINA GPPRQEAAPS 2460 FAATPSFLGK GAIRGEEQPA RSAGGSSGFA ALLQGAGPGG GSGGGGGGSM GGKPAGLANP 2520 FMQPSARLPV DVSEQHRQLA LLMQANGMGG PAAFPPGMFP PFLFPGLMPM LMGGLGQAGI 2580 PPQMAVAAAA AAAAGGAPPR LGPFGGPPRR PSEQELQHSL EVQQQMGQRL PDDYMAAALR 2640 SAAGQAAPGG QGQRDAGLRE RPNSSDVGEG RGPSSKGRST PLDDMRSLSP PPLQTMRSSQ 2700 QHELHEQEQP RPTAAPPPAS SLRASSGSIK LFGQSVGPQS SPPQQPLRPA VHAPVPRSSE 2760 GFRGPEGLSL ERPPPPHSLH SARDGLDRRG SDERKEDGRT EPPFWAASAS GGGTGWGRPE 2820 GGPSALPHWM VEQRPTEHEQ GGGPRAREEA NEGRSSRGVE GAASPMSGSS LQEAMARLLA 2880 LDPRAALPDR DRDGGRHGAE ASGDKKGHEG MRMASDGGTR SKSEASGMLR DRAGQGGERR 2940 PLEGTAPGNR GGGREMGGGG GGLALSDGPG GISMDNMRTA YEAMAAAREA GGPAQDGGGA 3000 RDMPRNVGPG SLPPWMQQGP VPEGHHAAVR PDMFFPNVGM AGWPGAMPQH PAAQAQMALM 3060 IQTFALQQAL QQQQQQQQQQ QRQYRPSDSR EGREQGPGNN AP

Sequence ? help Back to Top

Protein Sequence Length: 3102 aa Download sequence Send to blast

MPGNEELPVW GGGGRGHGPP YGRDRGERID RVDRGRRDFP ERPPGFARNV APIAPPQGPV  60
PLKRRGPGRP YVYGEARYGP PGMRGAEVGP APFLEGGPPP PAARRPERDA FYAAGSPPYG  120
PAGDFARREA GRDVGYGPEV PGEGPVARGA FYRERGDAVA RDLDGGPGWQ GREPPPPMAL  180
REFRERERVR SLDRGYRRPG FAAAPYGPPP PRDNRVDRFG REWLPDTTRR PPAASDDLPP  240
VDWKSLAELP SPREGSGGRD LPPREVGGPG LVAREVGPGF REGLGPRDGG FTTQEGPLTA  300
RDGFGTRDAS VAPPVPEPLY ARREAAVGSR DGFGGRDLGP LSTREPPFGL RDGGAALKEG  360
PYFPRERPGP SPWRTSMASP PGSVPGKGGL RDREDFPPRR EGPGERIDFN DQPGPAERRG  420
DERPALFERL AERPGRAPDR TDRSPGVFIS PPPHPEYPPD KPALDKVSPR GLSSAKGSPR  480
SENRPSPRSS EAAASPRRPT EKAPPKDSSL ADRAAGAAPP VAAPVLSVAP LVASIAPFSS  540
PSPLEPSMSG QSSEARAGER PRPRLGWGQG LVAFERVKPK DEEEQVSSAR RSSGADAGPE  600
SVGVSPAVSE SKSVAHTAEP EGGVVNSLQM HKDEGKEAPP AEAAEAESER ARVEASPATP  660
DSGKLVDLLL KTAVSEALAL DSEAGAPKAQ PSQAPVPDPQ APTIKAEAVT PKVGKSSPWP  720
QSLSALSEKE VPPKTEPPMT WPQSLSALTE KEGPVKPREA APKEGPVVSV DMGPATVEAS  780
PAVKASPWPQ SLSAAMGLVS APEGLAPIRT PRLEEQSPAG QVHSDGNSIF DSLLHRAQAS  840
DAGAAKPVNP SDSIPTSPLS PTFPQPSKEE PPAFPLSAST QPMTFSSLVG SSLPEPSHRS  900
PFGDAARLTS PYQDGPRRSY LETRPYGASP GLFSTGFHRS DSGSLGLGGA AWKPEDYLRS  960
DAGFRKDGAV EAGEGSLGRT PSEAVNLKEA VLASVGERGG LESGQKTPPP QARVEAAEKT  1020
EDQSSPMQVD GPVVAEGVAE GERKVEETEE DGPAATEKPG EGAAAEEVGT GEPSKDVILS  1080
EMEQVDSEIE RLERQLSRMA SLEKSGALAS TPTAQALAEA TGIVGVQAEA MKGSQEAEGA  1140
TTAEGLSQET GIEGVAGSKQ LGGTGTEKEE APTEEEGAEK GGEAAAEEGP GKGRTPKASE  1200
GPPSKAGSLK WKWAVAGNGD LSPDTGAGKQ ETGAAAQEVP EAGEEAAAKP EGDERGTEGA  1260
AAEVKEPAAA LQAKRDFDPL AMGGPDPFLK FEQIIASQDG LARYLTEQHP PPPKAVPKLE  1320
PKADELILSA GCQDRAVFVQ ARIWANREAA RRSEAGLQHL LPAGCQLGDG PLYTCPEEAP  1380
YWQVNEEAHA RIEEVLRARL QEKKRDLAFT ERVLALRYRF LRALWRQELE GVPARPALGK  1440
ARETPRLSKD KAIRRMESGS DRKAADAKAP PKSSQRFRPG GKLDAEELQI VSRLLAEPGG  1500
EVRGHLKMTP MILTDEERAA HKFVTRNALV RDPVQEAALH KLVNPWTDAE RKLFLEKYTV  1560
YNKNFKKIAS FLEHKSTADC IRFYYLHQKS EDFDKVRRRQ QLKKRRDYRG NNSFMGVNAL  1620
AGTTGRRDRE ANAARVEALP ALTAVMKESS KAARRAMDRG KPPSMPADVE RGSQSKVAAA  1680
AVSAVVRADR GGLLDPISGD APPRKKKRDK LKFRGGPPRP EQSEGPVGGE ANAEPGPASE  1740
GVIKRVSSKG ARSNLGRKER PWLDTGTPTG AGSEERVLGL ASPEDPALQW TDLERQTFVA  1800
AIREYGKDKS SAQCKAFFSK SRKRLGLDRL LEERSLKGTP GAGPEDGGAA NNGAAPEVGT  1860
GEKVGVASES DEDRTIAEVA SIKGQGSADK GALEVAGGAA GGAKEAAPFG KKVSNEELKR  1920
ELQLGLAKVQ EKAAILGRKE QEVKASAAPP TKPTLVVKPP AGVAPGVQKS PTSLPGGADD  1980
ELRAAMTLLE AKEGLSDSAD EMEMRPLGEV LKRKGSLVGA GGDAQRPKKK KKVEKTVGAA  2040
EAGGPPKKKA GKPKGEEAGP GSQGVEPKPM KPKPKKSGEG KASSVKGERS GKAASEDLEG  2100
SVHGAPSLWR AVLPKEEGGA ADGHEMSLMA TEGSLSCSDK EGDEAGEVSA QARPAKGPEK  2160
KAKPRTKKAA PEQDVPEAET FTALLAGGDS DESSGEPILG PGKQAPAAAA AGKKRDGGDK  2220
TPGERKIAVW TQEEKDRFGE MMTRQGKKKD WEQLQEAFPN KTLQQLRTHF QNSKAKRLKE  2280
LEREAAQAEK DKERHKDKDK ERDKEKEKEK EKERERERER ERESTPTPAP PARALAATPP  2340
LPEGLREVFS PDQVQQLQKL QAHLESERAA KLLAATFDTS KHSEPPSSRE VAQPGLAGSA  2400
SLTIPLPGRV RPMTPPPAPS QAHPAPGSRL PPQKKRKLED EQPEMGGINA GPPRQEAAPS  2460
FAATPSFLGK GAIRGEEQPA RSAGGSSGFA ALLQGAGPGG GSGGGGGGSM GGKPAGLANP  2520
FMQPSARLPV DVSEQHRQLA LLMQANGMGG PAAFPPGMFP PFLFPGLMPM LMGGLGQAGI  2580
PPQMAVAAAA AAAAGGAPPR LGPFGGPPRR PSEQELQHSL EVQQQMGQRL PDDYMAAALR  2640
SAAGQAAPGG QGQRDAGLRE RPNSSDVGEG RGPSSKGRST PLDDMRSLSP PPLQTMRSSQ  2700
QHELHEQEQP RPTAAPPPAS SLRASSGSIK LFGQSVGPQS SPPQQPLRPA VHAPVPRSSE  2760
GFRGPEGLSL ERPPPPHSLH SARDGLDRRG SDERKEDGRT EPPFWAASAS GGGTGWGRPE  2820
GGPSALPHWM VEQRPTEHEQ GGGPRAREEA NEGRSSRGVE GAASPMSGSS LQEAMARLLA  2880
LDPRAALPDR DRDGGRHGAE ASGDKKGHEG MRMASDGGTR SKSEASGMLR DRAGQGGERR  2940
PLEGTAPGNR GGGREMGGGG GGLALSDGPG GISMDNMRTA YEAMAAAREA GGPAQDGGGA  3000
RDMPRNVGPG SLPPWMQQGP VPEGHHAAVR PDMFFPNVGM AGWPGAMPQH PAAQAQMALM  3060
IQTFALQQAL QQQQQQQQQQ QRQYRPSDSR EGREQGPGNN AP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4a69_C	3e-15	1505	1593	5	93	NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D	3e-15	1505	1593	5	93	NUCLEAR RECEPTOR COREPRESSOR 2

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1703	1709	RKKKRDK
2	1703	1710	RKKKRDKL
3	2011	2031	KRKGSLVGAGGDAQRPKKKKK
4	2026	2032	PKKKKKV
5	2951	2959	GGREMGGGG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I6Z3	0.0	A0A1Y1I6Z3_KLENI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP3215	17	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	5e-26	MYB family protein