PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00202_0020 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 411aa MW: 44897.5 Da PI: 4.9506 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.6 | 2.8e-15 | 120 | 172 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++k q++eLe+l++ + + r+ +A+ lg terqV +WFqNrRa+++ kfl00202_0020 120 KRKLSKVQVRELEKLYQGGYTGAPAGRAAIAADLGTTERQVAIWFQNRRARQR 172 45899**********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 77.7 | 2e-25 | 118 | 206 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ++kr+lsk qv+ LE+ ++ + p ++++a +Lg + rqva+WFqnrRAR ++kq+ ++y+ Lk+ + + en+r+++e +eLr kfl00202_0020 118 QRKRKLSKVQVRELEKLYQGGYTGAPAGRAAIAADLGTTERQVAIWFQNRRARQRSKQTTQEYDLLKKDFRLILLENKRMRQELTELRL 206 59*************************************************************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 14.285 | 114 | 174 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 7.27E-13 | 115 | 175 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 1.0E-12 | 117 | 178 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.15E-7 | 118 | 175 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-14 | 118 | 180 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 1.2E-12 | 120 | 172 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence Send to blast |
MGFIICCPKE EVLASQAAQD MMQLVSAPLP VPPQSKLQLV VCLTPPLTPL VAEVFASQAA 60 QEIMQLVVSH HDSEELEQSS TQERTAPAVS GARSVKGGTS KASEEELGES QGDGGGDQRK 120 RKLSKVQVRE LEKLYQGGYT GAPAGRAAIA ADLGTTERQV AIWFQNRRAR QRSKQTTQEY 180 DLLKKDFRLI LLENKRMRQE LTELRLLVER SDATPDHAFL NFSASEKESA AARFDAAEPA 240 GQRALMPALH SPMVPIRAPG GVLEAPVENP RESLPRYAEG PPSHKRLRVD PPMATEGFAS 300 ESVHPVFGDV DFTDELWDSV ISSLEQSFGS EVIQDLFRNG DAFAELGLPK PPKYGYSLSL 360 QETRPGECHV SHVDHVARGR TDAGDLSLVQ SALAFQSDDY VGINSPCWAD L |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1I7N1 | 0.0 | A0A1Y1I7N1_KLENI; Homeobox-leucine zipper protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP196 | 16 | 156 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18550.1 | 7e-14 | homeobox protein 21 |