PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00202_0020

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HD-ZIP

Protein Properties

Length: 411aa MW: 44897.5 Da PI: 4.9506

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00202_0020	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.6	2.8e-15	120	172	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++k q++eLe+l++ + + r+ +A+ lg terqV +WFqNrRa+++ kfl00202_0020 120 KRKLSKVQVRELEKLYQGGYTGAPAGRAAIAADLGTTERQVAIWFQNRRARQR 172 45899**********************************************99 PP
2	HD-ZIP_I/II	77.7	2e-25	118	206	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ++kr+lsk qv+ LE+ ++ + p ++++a +Lg + rqva+WFqnrRAR ++kq+ ++y+ Lk+ + + en+r+++e +eLr kfl00202_0020 118 QRKRKLSKVQVRELEKLYQGGYTGAPAGRAAIAADLGTTERQVAIWFQNRRARQRSKQTTQEYDLLKKDFRLILLENKRMRQELTELRL 206 59*************************************************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	14.285	114	174	IPR001356	Homeobox domain
SuperFamily	SSF46689	7.27E-13	115	175	IPR009057	Homeodomain-like
SMART	SM00389	1.0E-12	117	178	IPR001356	Homeobox domain
CDD	cd00086	4.15E-7	118	175	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.3E-14	118	180	IPR009057	Homeodomain-like
Pfam	PF00046	1.2E-12	120	172	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence Send to blast
MGFIICCPKE EVLASQAAQD MMQLVSAPLP VPPQSKLQLV VCLTPPLTPL VAEVFASQAA 60 QEIMQLVVSH HDSEELEQSS TQERTAPAVS GARSVKGGTS KASEEELGES QGDGGGDQRK 120 RKLSKVQVRE LEKLYQGGYT GAPAGRAAIA ADLGTTERQV AIWFQNRRAR QRSKQTTQEY 180 DLLKKDFRLI LLENKRMRQE LTELRLLVER SDATPDHAFL NFSASEKESA AARFDAAEPA 240 GQRALMPALH SPMVPIRAPG GVLEAPVENP RESLPRYAEG PPSHKRLRVD PPMATEGFAS 300 ESVHPVFGDV DFTDELWDSV ISSLEQSFGS EVIQDLFRNG DAFAELGLPK PPKYGYSLSL 360 QETRPGECHV SHVDHVARGR TDAGDLSLVQ SALAFQSDDY VGINSPCWAD L

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence Send to blast

MGFIICCPKE EVLASQAAQD MMQLVSAPLP VPPQSKLQLV VCLTPPLTPL VAEVFASQAA  60
QEIMQLVVSH HDSEELEQSS TQERTAPAVS GARSVKGGTS KASEEELGES QGDGGGDQRK  120
RKLSKVQVRE LEKLYQGGYT GAPAGRAAIA ADLGTTERQV AIWFQNRRAR QRSKQTTQEY  180
DLLKKDFRLI LLENKRMRQE LTELRLLVER SDATPDHAFL NFSASEKESA AARFDAAEPA  240
GQRALMPALH SPMVPIRAPG GVLEAPVENP RESLPRYAEG PPSHKRLRVD PPMATEGFAS  300
ESVHPVFGDV DFTDELWDSV ISSLEQSFGS EVIQDLFRNG DAFAELGLPK PPKYGYSLSL  360
QETRPGECHV SHVDHVARGR TDAGDLSLVQ SALAFQSDDY VGINSPCWAD L

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I7N1	0.0	A0A1Y1I7N1_KLENI; Homeobox-leucine zipper protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP196	16	156

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18550.1	7e-14	homeobox protein 21