PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

kfl00174_0020

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB_related

Protein Properties

Length: 894aa MW: 94439.7 Da PI: 5.0012

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00174_0020	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.1	4.9e-09	521	567	1	47
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 rg++++eEd +++ +++G + t+k+ + ++ gR++ q++ rw + kfl00174_0020 521 RGPFSEEEDRRFLGKLAEYGRKiTFKKMTQFFP-GRSERQLRRRWVRL 567 89****************99*******.*********876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.726	516	571	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.8E-8	517	570	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.44E-8	519	572	IPR009057	Homeodomain-like
SMART	SM00717	5.8E-8	520	570	IPR001005	SANT/Myb domain
Pfam	PF00249	6.3E-7	521	567	IPR001005	SANT/Myb domain
CDD	cd00167	2.03E-6	523	568	No hit	No description
PROSITE profile	PS51519	10.512	579	669	IPR003035	RWP-RK domain
Pfam	PF02042	2.3E-8	596	647	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 894 aa Download sequence Send to blast
MASGATDAQT AVAMRADAIR LKKMQKKAAK ADSSNPLFLP SPNLMASALT HFSGGSSKGK 60 SKSKGTPRPA GHSTTQPQMS SPALQKSFSM PAAHPGNAER HAALLRAASA NLPQTRLSPF 120 SPSPPPIDAA LAALKAMPSF SSLLGSAPPL FGANRGGFAA DPVANILSQL QTNARADQTT 180 QLVAALLQTN KSVPGGGDML DTVAQLLLQR YAAQQQQQQQ QTLIQQLLNP TPPPLWQQPE 240 TFQIPEHDAS LSGPSDSSES DGGCPPRGSS SDESGDECLP QCDAGVSNSD GFESCSLNTD 300 GWGSELWPED DMSALDQLLG SGMGSLPDAN LDPMTWPEPI PSPPPRACST SRPEMSSPLS 360 PPRENASVDA LISALVAGSS GLATTILPPQ YPSTPVPASS FNPGSYVEAV ASAATLSTPP 420 PRSASPQSME ALVGLVESFV QQQNTPTLPS TGPLLSSLFV DEKPLPKTPP PKTPTKPAMV 480 KANLALVKVD PAPSSGALSA MPSEASGLTE AGKPDEQALK RGPFSEEEDR RFLGKLAEYG 540 RKITFKKMTQ FFPGRSERQL RRRWVRLKRK HNIVTISGVQ EVLDRLPPIP SEPGPITLEQ 600 LVDCFKLPMQ DACQKLSAGR PQVLTTQRFR QLFQKYGIAR WPYRQVMAGR PVPEILKAAE 660 EERARRKHLE SECSSARKAL GSSFPNPSNP WNLPATPPDN DSEDGWGGAV SESDDESSDS 720 DDDLLDAELD APDRSVTPPP ARNNSFGGFP ALPQGSPLSR CSSVVASRKA GIAVPSYLNF 780 SSPAKESFRG AEEKGSSKGG SGSQGKCPPV PEADVFSDMA AAMFLNDASD DVIPGDEPEW 840 QCLSMLVDDE EGPSGMNGTD GTDGGDVGHK RTASEAADMA LTSEEGAHKR ARSC

Sequence ? help Back to Top

Protein Sequence Length: 894 aa Download sequence Send to blast

MASGATDAQT AVAMRADAIR LKKMQKKAAK ADSSNPLFLP SPNLMASALT HFSGGSSKGK  60
SKSKGTPRPA GHSTTQPQMS SPALQKSFSM PAAHPGNAER HAALLRAASA NLPQTRLSPF  120
SPSPPPIDAA LAALKAMPSF SSLLGSAPPL FGANRGGFAA DPVANILSQL QTNARADQTT  180
QLVAALLQTN KSVPGGGDML DTVAQLLLQR YAAQQQQQQQ QTLIQQLLNP TPPPLWQQPE  240
TFQIPEHDAS LSGPSDSSES DGGCPPRGSS SDESGDECLP QCDAGVSNSD GFESCSLNTD  300
GWGSELWPED DMSALDQLLG SGMGSLPDAN LDPMTWPEPI PSPPPRACST SRPEMSSPLS  360
PPRENASVDA LISALVAGSS GLATTILPPQ YPSTPVPASS FNPGSYVEAV ASAATLSTPP  420
PRSASPQSME ALVGLVESFV QQQNTPTLPS TGPLLSSLFV DEKPLPKTPP PKTPTKPAMV  480
KANLALVKVD PAPSSGALSA MPSEASGLTE AGKPDEQALK RGPFSEEEDR RFLGKLAEYG  540
RKITFKKMTQ FFPGRSERQL RRRWVRLKRK HNIVTISGVQ EVLDRLPPIP SEPGPITLEQ  600
LVDCFKLPMQ DACQKLSAGR PQVLTTQRFR QLFQKYGIAR WPYRQVMAGR PVPEILKAAE  660
EERARRKHLE SECSSARKAL GSSFPNPSNP WNLPATPPDN DSEDGWGGAV SESDDESSDS  720
DDDLLDAELD APDRSVTPPP ARNNSFGGFP ALPQGSPLSR CSSVVASRKA GIAVPSYLNF  780
SSPAKESFRG AEEKGSSKGG SGSQGKCPPV PEADVFSDMA AAMFLNDASD DVIPGDEPEW  840
QCLSMLVDDE EGPSGMNGTD GTDGGDVGHK RTASEAADMA LTSEEGAHKR ARSC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1I0R7	0.0	A0A1Y1I0R7_KLENI; Uncharacterized protein