PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00159_0100
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family HB-other
Protein Properties Length: 1249aa    MW: 135197 Da    PI: 5.5294
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00159_0100genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.17.3e-098859172254
                    SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    ++yps +e+e LA+ ++L+  q+ +WF N R +
  kfl00159_0100 885 HPYPSDQEKEALAEATNLQRGQIANWFINARVR 917
                    89*****************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.5E-8861925IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.8E-24866927IPR009057Homeodomain-like
SuperFamilySSF466897.7E-16867928IPR009057Homeodomain-like
CDDcd000869.68E-10867922No hitNo description
PfamPF059204.7E-17878917IPR008422Homeobox KN domain
PROSITE profilePS5007111.402880921IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1249 aa     Download sequence    Send to blast
MQPGGFQGLD LEAVPDNAVW NARLDEFLRS RRLADPPADL TPSVLRRNTV VQSIAANAMD  60
RRADAQPSPL VQAGDVRMQG LPPSPISRPV GTRTPPLLDF DGFSWHRNSN TSGASLSAAM  120
AHPFVGALRD LQSLANGQEA ANHSIVSAPT FPGNTGSWEP VPGTDQLRVS PGHSPRSPRV  180
GPDFLIEAAA EYLREDRAER DESAVHTDPG PGTGLSLLSP FPSTDFPGKQ TTARGGDGKT  240
AKAKPLPATE SPRVSSLTSL YPVTPPGGEN TPRDSPTDRA PPNPLQHIDP PSAQSPSLLD  300
YYRLLAMRLP SDAPARLAAE LQELNPQTLH FASDFWAQLA AVRALQAHDP LSAVASSQFS  360
EPSLLALRSL LNFPYGPPAY GHVAHDKAAL RQQLAHQEAL ERHRLDLRAF ELQNQERRLA  420
EFYIPPSSPY AGIGPGDLAP STERAFFTDR RAGLAPESES FAGRKANKLA PRKASFSPRR  480
TDTDAERAGP QQRSPGQPSP LSASSPTGDA FLHNLLTSPP HSPLGLTGVA RAAEYASPVG  540
RDAEHLRYAL ADPGRWLEEE AVERPTRGGR EGPKASAVID LGGRRKSKRG HTEAEEEAEQ  600
TGVPQRERPR RKSARLSKSR TDVEEQLGLP SRSRSAGPDR LPVPAPLPAF DAPAGTEWVA  660
GKSKYMPALL HILEEINQLA LVSPERAEAE RAGLNRELVI RRNELESELE VSGADRQTLA  720
SEAEDLEALL VEVQTKKMEY LHENDVLGAQ FSASLGVAPH VAESYMKGPR EIVAGRFEEV  780
ERSLSADLER ARRQLGVMAR SRRPERNGPN KLDLRPPLAI GASGPAKGGR EMALAGPARH  840
MSVRELKERA RAFERGGARV GSGARGLSRT AVSILRGWLF DHFLHPYPSD QEKEALAEAT  900
NLQRGQIANW FINARVRVWK PMIEQMYKEQ KEKEAAEQTG AGPDQGPDSE EQLRLLDVGQ  960
RMRSEDEDFQ ESGEEEDSFG SPDELAHPRR RTNSPDVSAG RPITRAARRK DRRPSDPSEF  1020
PGGPFPGISE LEGPGNEIPS TNAPSGLAAK QAWPVEGRGG ESEFAESGQE AAEPAQENAG  1080
HGFLGEYGGD ELLGDILEQV PAEAEDAPAY PGGAETEHLL EGGQHDSARE KLPGEAPRRG  1140
RGKEGDQGAG KKGSGRQMVG SVEECEYAPG DSGVNTLSEG GDRRGFVGVW DEERGERHME  1200
IEGSGSPAEQ RGTFGRHGHS PEFVACQDLD MEKEAPELPR LSEKRGRFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A4e-15869925763Homeobox protein Meis2
4xrm_B4e-15869925763Homeobox protein Meis2
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1607611RPRRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1I1890.0A0A1Y1I189_KLENI; Homeodomain protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13316172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-23BEL1-like homeodomain 11