PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

kfl00118_0210

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB_related

Protein Properties

Length: 620aa MW: 68249.2 Da PI: 7.0106

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00118_0210	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.5e-09	198	240	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++++eE l + + lG+ W+ +a+ ++ gRt+k++ks+w++ kfl00118_0210 198 MPFSEEEAMLVLVGRYILGNC-WTDVAKFLP-GRTGKMVKSFWHS 240 689**************99.*****.*********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.659	192	246	IPR017930	Myb domain
SuperFamily	SSF46689	6.52E-10	195	253	IPR009057	Homeodomain-like
SMART	SM00717	5.8E-8	196	244	IPR001005	SANT/Myb domain
Pfam	PF00249	6.2E-8	198	240	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.6E-10	199	245	IPR009057	Homeodomain-like
CDD	cd00167	1.99E-6	199	242	No hit	No description
Gene3D	G3DSA:3.30.40.10	2.0E-7	343	410	IPR013083	Zinc finger, RING/FYVE/PHD-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence Send to blast
MAAASPLPPS ASRPIAKSKL KRGASDLIDP LFYNHLLDEL RQHQDAGTAY YGSFLYEPQP 60 VPASLLLPSG TPIFQSEDHT SLPQAGKNAA VFERVASAKV NKDSAGVKLL TEPPESVRSR 120 VLSQSPAGRP LQRAGSGFRS PPVTGKPSDL KPAVEAVTFI EKAKSHYGGS SAGGWKEQLS 180 AQLIQRAAQW EHVDLQSMPF SEEEAMLVLV GRYILGNCWT DVAKFLPGRT GKMVKSFWHS 240 KLRPRYYKYG WKGRELSPPP ELHKSAQIRP GSAAGEGLKG GAGDTGGDDS EDDEPREEVE 300 EETNEEALAR EHALMQAALA ARDPAAVLRA YHLQYERLLA AIEEQAAARK DWEERCFLCK 360 DGGDLLCCQE GHREGGAPCW KAYHVACLGT RAPTSEDSFW CCPRHACASD RCSEPVQSEC 420 ATCSNSYCEQ HRQGHLDPQS PDKAGGMQRI VCDRCRALRG DNQSEAGGRG AASESPTAAS 480 ERKRRQRQRE RDEAKRVEME RQRERRERDR RKREEDAERE HADDADSPEW VRMLSSIKHM 540 PTNNGGPIVS RIEKATALAR GRVHPEVIAQ LQLAVSAAVY KSNAAGNTRN QALAAIDLHR 600 THERCEKGTL DDIADDPDAS

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence Send to blast

MAAASPLPPS ASRPIAKSKL KRGASDLIDP LFYNHLLDEL RQHQDAGTAY YGSFLYEPQP  60
VPASLLLPSG TPIFQSEDHT SLPQAGKNAA VFERVASAKV NKDSAGVKLL TEPPESVRSR  120
VLSQSPAGRP LQRAGSGFRS PPVTGKPSDL KPAVEAVTFI EKAKSHYGGS SAGGWKEQLS  180
AQLIQRAAQW EHVDLQSMPF SEEEAMLVLV GRYILGNCWT DVAKFLPGRT GKMVKSFWHS  240
KLRPRYYKYG WKGRELSPPP ELHKSAQIRP GSAAGEGLKG GAGDTGGDDS EDDEPREEVE  300
EETNEEALAR EHALMQAALA ARDPAAVLRA YHLQYERLLA AIEEQAAARK DWEERCFLCK  360
DGGDLLCCQE GHREGGAPCW KAYHVACLGT RAPTSEDSFW CCPRHACASD RCSEPVQSEC  420
ATCSNSYCEQ HRQGHLDPQS PDKAGGMQRI VCDRCRALRG DNQSEAGGRG AASESPTAAS  480
ERKRRQRQRE RDEAKRVEME RQRERRERDR RKREEDAERE HADDADSPEW VRMLSSIKHM  540
PTNNGGPIVS RIEKATALAR GRVHPEVIAQ LQLAVSAAVY KSNAAGNTRN QALAAIDLHR  600
THERCEKGTL DDIADDPDAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	485	ERKRRQ
2	504	513	RRERDRRKRE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HY11	0.0	A0A1Y1HY11_KLENI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G39880.1	2e-09	myb domain protein 25